RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 SDHAF4Q5VUM1 108 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 TXNDC8Q6A555 127 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 RABEPKQ7Z6M1 372 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 TMEM150AQ86TG1 271 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 CREBRFQ8IUR6 639 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 NAXDQ8IW45 347 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 C12orf29Q8N999 325 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 TTC16Q8NEE8 873 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 TRMT2BQ96GJ1 504 aaKnown RBP13.14□□□□□ -0.31
SSR4-205ENST00000447375 ARID3AQ99856 593 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 DNAI2Q9GZS0 605 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 TMEM30AQ9NV96 361 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 MYH10P35580 1976 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 F8VP50 259 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 TRIM66O15016 1216 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 AP5Z1O43299 807 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 TRIM21P19474 475 aaKnown RBP13.13□□□□□ -0.31
SSR4-205ENST00000447375 PTMSP20962 102 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 TBXAS1P24557 533 aaPredicted RBP13.13□□□□□ -0.31
SSR4-205ENST00000447375 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
SSR4-205ENST00000447375 RAD23BP54727 409 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 MRPS21P82921 87 aaKnown RBP13.13□□□□□ -0.31
SSR4-205ENST00000447375 LRMPQ12912 555 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 ORC1Q13415 861 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 KLHL40Q2TBA0 621 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 EML3Q32P44 896 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 CAVIN1Q6NZI2 390 aaKnown RBP13.13□□□□□ -0.31
SSR4-205ENST00000447375 TMPRSS7Q7RTY8 843 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 FAM35AQ86V20 835 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 ZNF843Q8N446 348 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 UBR7Q8N806 425 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 ATP2A3Q93084 1043 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 TMEM176AQ96HP8 235 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 NT5C1BQ96P26 610 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 HNRNPABQ99729 332 aaKnown RBP13.13□□□□□ -0.31
SSR4-205ENST00000447375 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 SAMSN1Q9NSI8 373 aaKnown RBP13.13□□□□□ -0.31
SSR4-205ENST00000447375 KIAA1522Q9P206 1035 aaPredicted RBP13.13□□□□□ -0.31
SSR4-205ENST00000447375 NFE2L3Q9Y4A8 694 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 ADAMTS9Q9P2N4 1935 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 ATP8B3O60423 1300 aa13.13□□□□□ -0.31
SSR4-205ENST00000447375 TNRC6BQ9UPQ9 1833 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 GTPBP10A4D1E9 387 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 TRABD2BA6NFA1 517 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 J3QKU1 62 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 GJB3O75712 270 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 CCDC130P13994 396 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 ANXA13P27216 316 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 ABCG1P45844 678 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 YWHAEP62258 255 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 RPL6Q02878 288 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 TYRO3Q06418 890 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 MAN2A1Q16706 1144 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 C11orf57Q6ZUT1 292 aaPredicted RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 LURAP1LQ8IV03 231 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 ALLCQ8N6M5 410 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 SLC4A11Q8NBS3 891 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 TXNDC5Q8NBS9 432 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 LSM14AQ8ND56 463 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 STKLD1Q8NE28 680 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 PIP4K2CQ8TBX8 421 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 MRPS31Q92665 395 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 CYFIP2Q96F07 1278 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 SMARCD1Q96GM5 515 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 HEXIM2Q96MH2 286 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 KCNK16Q96T55 309 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 TUBGCP2Q9BSJ2 902 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 TTLL2Q9BWV7 592 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 INTS2Q9H0H0 1204 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 CSNK1G1Q9HCP0 422 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 EHD2Q9NZN4 543 aa13.12□□□□□ -0.31
SSR4-205ENST00000447375 UXTQ9UBK9 157 aaPredicted RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 MAGED2Q9UNF1 606 aaPredicted RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 URB1O60287 2271 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 MYO18AQ92614 2054 aaKnown RBP13.12□□□□□ -0.31
SSR4-205ENST00000447375 KCNJ18B7U540 433 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 AP1G2O75843 785 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 KLF8O95600 359 aaPredicted RBP13.11□□□□□ -0.31
SSR4-205ENST00000447375 PRKCSHP14314 528 aaPredicted RBP13.11□□□□□ -0.31
SSR4-205ENST00000447375 ACO1P21399 889 aaKnown RBP13.11□□□□□ -0.31
SSR4-205ENST00000447375 EEF1GP26641 437 aaKnown RBP13.11□□□□□ -0.31
SSR4-205ENST00000447375 OPRD1P41143 372 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 USP46P62068 366 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 GCNT1Q02742 428 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 ZNF33AQ06730 810 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 KCNJ12Q14500 433 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 ZNF77Q15935 545 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 VWA3BQ502W6 1294 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 ZNF394Q53GI3 561 aa13.11□□□□□ -0.31
SSR4-205ENST00000447375 HSP90AA4PQ58FG1 418 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms