RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PDP2Q9P2J9 529 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 KIAA1257Q9ULG3 409 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 BARX2Q9UMQ3 279 aaPredicted RBP19.75■□□□□ 0.75
SDCBP-204ENST00000447182 PCDHA11Q9Y5I1 949 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 LACTBL1A8MY62 500 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 PRR5-ARHGAP8B1AHC4 643 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 INO80B-WBP1J3KQ70 363 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 MDM4O15151 490 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 KITP10721 976 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 GNAT1P11488 350 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 CRABP2P29373 138 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 ARHGAP8P85298 464 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 MROH9Q5TGP6 573 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 RNF220Q5VTB9 566 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 TRMT10BQ6PF06 316 aaKnown RBP19.75■□□□□ 0.75
SDCBP-204ENST00000447182 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
SDCBP-204ENST00000447182 ADGRG6Q86SQ4 1221 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 CDKL3Q8IVW4 592 aaPredicted RBP19.75■□□□□ 0.75
SDCBP-204ENST00000447182 MFN1Q8IWA4 741 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 ADGRF2Q8IZF7 708 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 GALNT15Q8N3T1 639 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 INO80BQ9C086 356 aaPredicted RBP19.75■□□□□ 0.75
SDCBP-204ENST00000447182 MOCS1Q9NZB8 636 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 MARCOQ9UEW3 520 aaPredicted RBP19.75■□□□□ 0.75
SDCBP-204ENST00000447182 C2CD2Q9Y426 696 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 FKBP6O75344 327 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 TOMM70O94826 608 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 CYP3A5P20815 502 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 CPOXP36551 454 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 ALDH18A1P54886 795 aaKnown RBP19.74■□□□□ 0.75
SDCBP-204ENST00000447182 ROR2Q01974 943 aaKnown RBP19.74■□□□□ 0.75
SDCBP-204ENST00000447182 DSG1Q02413 1049 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 MBTD1Q05BQ5 628 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 TMEM132AQ24JP5 1023 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 MDH1BQ5I0G3 518 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 MAP1SQ66K74 1059 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-204ENST00000447182 JADE1Q6IE81 842 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 RFX8Q6ZV50 586 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 PLPPR4Q7Z2D5 763 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 SAMD7Q7Z3H4 446 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 CDR2LQ86X02 465 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-204ENST00000447182 RILPQ96NA2 401 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 XAB2Q9HCS7 855 aaKnown RBP19.74■□□□□ 0.75
SDCBP-204ENST00000447182 NDE1Q9NXR1 346 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 SOX13Q9UN79 622 aa19.74■□□□□ 0.75
SDCBP-204ENST00000447182 TNS1Q9HBL0 1735 aaKnown RBP19.73■□□□□ 0.75
SDCBP-204ENST00000447182 GSRP00390 522 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 FAM182AQ5T1J6 154 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 AAGABQ6PD74 315 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 PAXIP1Q6ZW49 1069 aaPredicted RBP19.73■□□□□ 0.75
SDCBP-204ENST00000447182 PHC3Q8NDX5 983 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 ACMSDQ8TDX5 336 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 ZBTB10Q96DT7 871 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 CLPTM1LQ96KA5 538 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 CCDC28BQ9BUN5 200 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 GCOM2Q9BZD3 368 aaPredicted RBP19.73■□□□□ 0.75
SDCBP-204ENST00000447182 FAM192AQ9GZU8 254 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 GPATCH2LQ9NWQ4 482 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 MAD1L1Q9Y6D9 718 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 SOWAHBA6NEL2 793 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 GPR25O00155 361 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 PFKMP08237 780 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 TUBB3Q13509 450 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 C1orf146Q5VVC0 180 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 CWF19L1Q69YN2 538 aaKnown RBP19.73■□□□□ 0.75
SDCBP-204ENST00000447182 SCYL2Q6P3W7 929 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 WDR75Q8IWA0 830 aaKnown RBP19.73■□□□□ 0.75
SDCBP-204ENST00000447182 TMEM130Q8N3G9 435 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 TTC39CQ8N584 583 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 NLRP4Q96MN2 994 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 GPR20Q99678 358 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 ECSITQ9BQ95 431 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 EBF4Q9BQW3 602 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 SNRNP25Q9BV90 132 aaKnown RBP19.73■□□□□ 0.75
SDCBP-204ENST00000447182 ASB7Q9H672 318 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 TSPAN16Q9UKR8 245 aa19.73■□□□□ 0.75
SDCBP-204ENST00000447182 A0A088AWK7 358 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 METTL18O95568 372 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 STAG3L1P0CL83 205 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 LY6KQ17RY6 165 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 FOXB2Q5VYV0 432 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 MBLAC2Q68D91 279 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 OLFML1Q6UWY5 402 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 MICALL2Q8IY33 904 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 MPP5Q8N3R9 675 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 PIWIL2Q8TC59 973 aaKnown RBP19.72■□□□□ 0.75
SDCBP-204ENST00000447182 FAM172AQ8WUF8 416 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 DEPDC1BQ8WUY9 529 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 AFG1LQ8WV93 481 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 HPDLQ96IR7 371 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 NFKBIZQ9BYH8 718 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 NRDE2Q9H7Z3 1164 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 MINDY3Q9H8M7 445 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 PIDD1Q9HB75 910 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 NGRNQ9NPE2 291 aaKnown RBP19.72■□□□□ 0.75
SDCBP-204ENST00000447182 A0A0G2JMZ2 1700 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 LRRC37A2A6NM11 1700 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 CSDE1O75534 798 aaKnown RBP19.72■□□□□ 0.75
SDCBP-204ENST00000447182 GRAP2O75791 330 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 ALDH1A2O94788 518 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms