RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 VSTM1Q6UX27 236 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 KDM7AQ6ZMT4 941 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 CENPUQ71F23 418 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 NECAB2Q7Z6G3 386 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 FAM131BQ86XD5 332 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 PLD5Q8N7P1 536 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 OR10T2Q8NGX3 314 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 SLC7A14Q8TBB6 771 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 RNF139Q8WU17 664 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 C2orf15Q8WU43 125 aaKnown RBP10.84□□□□□ -0.67
CALD1-211ENST00000445569 RIN2Q8WYP3 895 aaPredicted RBP10.84□□□□□ -0.67
CALD1-211ENST00000445569 PGM2Q96G03 612 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 PAWRQ96IZ0 340 aaKnown RBP10.84□□□□□ -0.67
CALD1-211ENST00000445569 QKIQ96PU8 341 aaKnown RBP eCLIP10.84□□□□□ -0.67
CALD1-211ENST00000445569 CSPG4P5Q96PW8 444 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
CALD1-211ENST00000445569 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 CDC42EP4Q9H3Q1 356 aaKnown RBP10.84□□□□□ -0.67
CALD1-211ENST00000445569 PRG3Q9Y2Y8 225 aaPredicted RBP10.84□□□□□ -0.67
CALD1-211ENST00000445569 PCDHB5Q9Y5E4 795 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 H7C4K7 107 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 ENPP3O14638 875 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 PPP1R12AO14974 1030 aaPredicted RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 DDHD2O94830 711 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 TTC4O95801 387 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 NCAM1P13591 858 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 TSHRP16473 764 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 HIF1AQ16665 826 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 CA9Q16790 459 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 SLC45A4Q5BKX6 768 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 HABP4Q5JVS0 413 aaKnown RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 C6orf118Q5T5N4 469 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 OTUD1Q5VV17 481 aaPredicted RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 GPRIN1Q7Z2K8 1008 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 ZNF280BQ86YH2 543 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 RIBC1Q8N443 379 aaPredicted RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 CCDC185Q8N715 623 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 PQLC3Q8N755 202 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 PCDH19Q8TAB3 1148 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 PRCCQ92733 491 aaPredicted RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 CASD1Q96PB1 797 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 RBM15Q96T37 977 aaKnown RBP eCLIP10.83□□□□□ -0.68
CALD1-211ENST00000445569 EPAS1Q99814 870 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 KLC2Q9H0B6 622 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 FBXO44Q9H4M3 255 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 CNOT10Q9H9A5 744 aaKnown RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 DDIT4Q9NX09 232 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 NR2E3Q9Y5X4 410 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 USP3Q9Y6I4 520 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 LTBP2Q14767 1821 aa10.83□□□□□ -0.68
CALD1-211ENST00000445569 FNDC1Q4ZHG4 1894 aaPredicted RBP10.83□□□□□ -0.68
CALD1-211ENST00000445569 TTC3P53804 2025 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 A0A087WUV0 522 aaPredicted RBP10.82□□□□□ -0.68
CALD1-211ENST00000445569 YJEFN3A6XGL0 299 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 E7ENQ6 273 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 EEF2KO00418 725 aaKnown RBP10.82□□□□□ -0.68
CALD1-211ENST00000445569 CHADO15335 359 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 TP73O15350 636 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 RGS16O15492 202 aaPredicted RBP10.82□□□□□ -0.68
CALD1-211ENST00000445569 AGTP01019 485 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 ITGB1P05556 798 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
CALD1-211ENST00000445569 TFE3P19532 575 aaPredicted RBP10.82□□□□□ -0.68
CALD1-211ENST00000445569 FGFR3P22607 806 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 SERPINB6P35237 376 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 GRIK1P39086 918 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 HCAR3P49019 387 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 LMAN1P49257 510 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 NDUFV1P49821 464 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 SLC5A3P53794 718 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 TPI1P60174 286 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 YWHAGP61981 247 aaKnown RBP eCLIP10.82□□□□□ -0.68
CALD1-211ENST00000445569 SKOR1P84550 965 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 NME3Q13232 169 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 STAT4Q14765 748 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 CTXN3Q4LDR2 81 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 SLC39A12Q504Y0 691 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 RAB6CQ53S08 254 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 BRMS1LQ5PSV4 323 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
CALD1-211ENST00000445569 HEATR6Q6AI08 1181 aaKnown RBP10.82□□□□□ -0.68
CALD1-211ENST00000445569 MFSD5Q6N075 450 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 CNKSR3Q6P9H4 555 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 C1orf228Q6PIY5 440 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 ANKS3Q6ZW76 656 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 TAOK1Q7L7X3 1001 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 FAM71DQ8N9W8 422 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 OR2W6PQ8NHA6 318 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 SPPL2BQ8TCT7 592 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 DIS3LQ8TF46 1054 aaKnown RBP10.82□□□□□ -0.68
CALD1-211ENST00000445569 ARL8AQ96BM9 186 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 C8orf48Q96LL4 319 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 SERPINB12Q96P63 405 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 KCNK16Q96T55 309 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 RAB6CQ9H0N0 254 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 EPB41L4BQ9H329 900 aa10.82□□□□□ -0.68
CALD1-211ENST00000445569 CENPHQ9H3R5 247 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms