RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 DNAJB3Q8WWF6 145 aa18.48■□□□□ 0.55
CLDN9-201ENST00000445369 TSPAN18Q96SJ8 248 aa18.48■□□□□ 0.55
CLDN9-201ENST00000445369 SNX25Q9H3E2 840 aa18.48■□□□□ 0.55
CLDN9-201ENST00000445369 ZNF180Q9UJW8 692 aa18.48■□□□□ 0.55
CLDN9-201ENST00000445369 USP3Q9Y6I4 520 aa18.48■□□□□ 0.55
CLDN9-201ENST00000445369 ZNF638Q14966 1978 aaKnown RBP18.47■□□□□ 0.55
CLDN9-201ENST00000445369 TRDMT1O14717 391 aaKnown RBP18.47■□□□□ 0.55
CLDN9-201ENST00000445369 XPOTO43592 962 aaKnown RBP18.47■□□□□ 0.55
CLDN9-201ENST00000445369 SLC8A1P32418 973 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 SOX4Q06945 474 aaPredicted RBP18.47■□□□□ 0.55
CLDN9-201ENST00000445369 TTC39BQ5VTQ0 682 aaPredicted RBP18.47■□□□□ 0.55
CLDN9-201ENST00000445369 FYB2Q5VWT5 728 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 NCBP2-AS2Q69YL0 99 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 STRADAQ7RTN6 431 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 VPS52Q8N1B4 723 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 APPL2Q8NEU8 664 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 PTPRN2Q92932 1015 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 MANSC1Q9H8J5 431 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLDN9-201ENST00000445369 DOCK3Q8IZD9 2030 aa18.47■□□□□ 0.55
CLDN9-201ENST00000445369 CXorf49A8MYA2 514 aaPredicted RBP18.46■□□□□ 0.55
CLDN9-201ENST00000445369 C2CD2LO14523 706 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 ATP5HO75947 161 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 GSTA2P09210 222 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 PYGBP11216 843 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 TKTP29401 623 aaKnown RBP18.46■□□□□ 0.55
CLDN9-201ENST00000445369 PREPLQ4J6C6 727 aaPredicted RBP18.46■□□□□ 0.55
CLDN9-201ENST00000445369 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 WLSQ5T9L3 541 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 KCNT2Q6UVM3 1135 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 LRRC6Q86X45 466 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 GOLGA2P5Q9HBQ8 144 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 XPO1O14980 1071 aaKnown RBP18.46■□□□□ 0.55
CLDN9-201ENST00000445369 SV2CQ496J9 727 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 SPDYAQ5MJ70 313 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 TLK2Q86UE8 772 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 ADGRF2Q8IZF7 708 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 PPM1NQ8N819 430 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 SIGLEC10Q96LC7 697 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 PTPN18Q99952 460 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 NPHS2Q9NP85 383 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 SMYD2Q9NRG4 433 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 DTLQ9NZJ0 730 aa18.46■□□□□ 0.55
CLDN9-201ENST00000445369 TSC2P49815 1807 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 TRIM49D1C9J1S8 452 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 HAS3O00219 553 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 CAPN15O75808 1086 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 APOEP02649 317 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 MATKP42679 507 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 IRF5Q13568 498 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 PLEKHG4Q58EX7 1191 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 EFHC1Q5JVL4 640 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 UNC5AQ6ZN44 842 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 NLRP9Q7RTR0 991 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 OSTM1Q86WC4 334 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 CTAGE3PQ8IX95 158 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 LENG1Q96BZ8 264 aaPredicted RBP18.45■□□□□ 0.54
CLDN9-201ENST00000445369 OLFM3Q96PB7 478 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 FAM111AQ96PZ2 611 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 LRMDAQ9H2I8 198 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 TREHO43280 583 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 TROVE2P10155 538 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLDN9-201ENST00000445369 GOT1P17174 413 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 WARSP23381 471 aaKnown RBP18.45■□□□□ 0.54
CLDN9-201ENST00000445369 PSEN2P49810 448 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 SEMA5AQ13591 1074 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 TNIP3Q96KP6 325 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 DNAI2Q9GZS0 605 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 RCOR3Q9P2K3 495 aaPredicted RBP18.45■□□□□ 0.54
CLDN9-201ENST00000445369 KANSL3Q9P2N6 904 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 FZD10Q9ULW2 581 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 MFHAS1Q9Y4C4 1052 aa18.45■□□□□ 0.54
CLDN9-201ENST00000445369 DAB1O75553 588 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 DGKIO75912 1065 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 KRT37O76014 449 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 SNRPAP09012 282 aaKnown RBP18.44■□□□□ 0.54
CLDN9-201ENST00000445369 VAV1P15498 845 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 AMPD1P23109 780 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 SLC25A52Q3SY17 297 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 OTUD1Q5VV17 481 aaPredicted RBP18.44■□□□□ 0.54
CLDN9-201ENST00000445369 OLFML2BQ68BL8 750 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 HEATR6Q6AI08 1181 aaKnown RBP18.44■□□□□ 0.54
CLDN9-201ENST00000445369 PIGZQ86VD9 579 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 DEFB106AQ8N104 65 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 PYROXD2Q8N2H3 581 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 CCDC33Q8N5R6 958 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 B3GALNT2Q8NCR0 500 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 ARRDC4Q8NCT1 418 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 HNRNPABQ99729 332 aaKnown RBP18.44■□□□□ 0.54
CLDN9-201ENST00000445369 EBNA1BP2Q99848 306 aaKnown RBP18.44■□□□□ 0.54
CLDN9-201ENST00000445369 ALG13Q9NP73 1137 aaKnown RBP18.44■□□□□ 0.54
CLDN9-201ENST00000445369 IPPQ9Y573 584 aa18.44■□□□□ 0.54
CLDN9-201ENST00000445369 HUS1O60921 280 aa18.43■□□□□ 0.54
CLDN9-201ENST00000445369 TARSP26639 723 aaKnown RBP18.43■□□□□ 0.54
CLDN9-201ENST00000445369 CCNFP41002 786 aa18.43■□□□□ 0.54
CLDN9-201ENST00000445369 SULT1E1P49888 294 aa18.43■□□□□ 0.54
CLDN9-201ENST00000445369 LILRA4P59901 499 aa18.43■□□□□ 0.54
CLDN9-201ENST00000445369 ADIGQ0VDE8 80 aa18.43■□□□□ 0.54
CLDN9-201ENST00000445369 MORN1Q5T089 497 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms