RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 MMEP08473 750 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 GJA4P35212 333 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 DGKKQ5KSL6 1271 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 HTR3DQ70Z44 454 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 FMNL3Q8IVF7 1028 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 SLC20A1Q8WUM9 679 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 DDX1Q92499 740 aaKnown RBP25.03■■□□□ 1.6
C9orf3-207ENST00000445181 EXOC4Q96A65 974 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 TRIM62Q9BVG3 475 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 TJP2Q9UDY2 1190 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 SFMBT1Q9UHJ3 866 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 PCDHGA2Q9Y5H1 932 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 VPS13AQ96RL7 3174 aa25.03■■□□□ 1.6
C9orf3-207ENST00000445181 CAPN9O14815 690 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 STC2O76061 302 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 ADH1CP00326 375 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 CYP17A1P05093 508 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 NCAM1P13591 858 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 CCR3P51677 355 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 GAS6Q14393 721 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 PPP2R5DQ14738 602 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 DHCR24Q15392 516 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 ZBTB44Q8NCP5 570 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 NELL1Q92832 810 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 DCLK3Q9C098 648 aa25.02■■□□□ 1.6
C9orf3-207ENST00000445181 NOCTQ9UK39 431 aaKnown RBP25.02■■□□□ 1.6
C9orf3-207ENST00000445181 FAM170AA1A519 330 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 LSM8O95777 96 aaKnown RBP25.01■■□□□ 1.59
C9orf3-207ENST00000445181 CCDC172P0C7W6 258 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 CXCL12P48061 93 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 CDR2Q01850 454 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 OR6B2Q6IFH4 312 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 SPEM1Q8N4L4 309 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 MSANTD4Q8NCY6 345 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 RNF214Q8ND24 703 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 ZNF510Q9Y2H8 683 aa25.01■■□□□ 1.59
C9orf3-207ENST00000445181 FANCMQ8IYD8 2048 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 PTPRZ1P23471 2315 aaPredicted RBP25■■□□□ 1.59
C9orf3-207ENST00000445181 ERBB2P04626 1255 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 CORO1AP31146 461 aaKnown RBP25■■□□□ 1.59
C9orf3-207ENST00000445181 YWHAZP63104 245 aaKnown RBP25■■□□□ 1.59
C9orf3-207ENST00000445181 GRSF1Q12849 480 aaKnown RBP eCLIP25■■□□□ 1.59
C9orf3-207ENST00000445181 PTPN20Q4JDL3 420 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 LY6G5CQ5SRR4 150 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 RHBDF2Q6PJF5 856 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 ERICH1Q86X53 443 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 PLD4Q96BZ4 506 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 P2RY13Q9BPV8 354 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 FAM126AQ9BYI3 521 aaPredicted RBP25■■□□□ 1.59
C9orf3-207ENST00000445181 POPDC2Q9HBU9 364 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 IFNKQ9P0W0 207 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 NAALADL1Q9UQQ1 740 aa25■■□□□ 1.59
C9orf3-207ENST00000445181 HBS1LQ9Y450 684 aaKnown RBP25■■□□□ 1.59
C9orf3-207ENST00000445181 RIF1Q5UIP0 2472 aaKnown RBP25■■□□□ 1.59
C9orf3-207ENST00000445181 MSI1O43347 362 aaKnown RBP24.99■■□□□ 1.59
C9orf3-207ENST00000445181 GREM1O60565 184 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 TPM3P06753 285 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 ADH5P11766 374 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 TDGF1P13385 188 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 FERP16591 822 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 CDH5P33151 784 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-207ENST00000445181 HARS2P49590 506 aaKnown RBP24.99■■□□□ 1.59
C9orf3-207ENST00000445181 SATB1Q01826 763 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 CCINQ13939 588 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 ANO4Q32M45 955 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 EFHC1Q5JVL4 640 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 NAA35Q5VZE5 725 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 MSANTD2Q6P1R3 559 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 Q6ZS52 159 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 TOGARAM2Q6ZUX3 1019 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 FAM183BPQ6ZVS7 135 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 CPA5Q8WXQ8 436 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 SPHK2Q9NRA0 654 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 SEPT11Q9NVA2 429 aaKnown RBP24.99■■□□□ 1.59
C9orf3-207ENST00000445181 MYO15AQ9UKN7 3530 aa24.99■■□□□ 1.59
C9orf3-207ENST00000445181 FYNP06241 537 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 GALK1P51570 392 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 NRLP54845 237 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 GAD2Q05329 585 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 Q6ZNB5 142 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 DENND1CQ8IV53 801 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 SYNPOQ8N3V7 929 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 SUMF1Q8NBK3 374 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 CD101Q93033 1021 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 CHFRQ96EP1 664 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 PIWIL1Q96J94 861 aaKnown RBP24.98■■□□□ 1.59
C9orf3-207ENST00000445181 MYO6Q9UM54 1294 aa24.98■■□□□ 1.59
C9orf3-207ENST00000445181 LRRC53A6NM62 1247 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 TRDMT1O14717 391 aaKnown RBP24.97■■□□□ 1.59
C9orf3-207ENST00000445181 LILRB5O75023 590 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 KLKB1P03952 638 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 CHRNB2P17787 502 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 ZNF445P59923 1031 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 NOMO3P69849 1222 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 FMO1Q01740 532 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 SLC6A3Q01959 620 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 TAF5Q15542 800 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 TMEM196Q5HYL7 178 aa24.97■■□□□ 1.59
C9orf3-207ENST00000445181 NAIF1Q69YI7 327 aaPredicted RBP24.97■■□□□ 1.59
C9orf3-207ENST00000445181 TRIM72Q6ZMU5 477 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms