RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SLITRK6Q9H5Y7 841 aa18■□□□□ 0.47
LIME1-202ENST00000444951 CCSER2Q9H7U1 834 aa18■□□□□ 0.47
LIME1-202ENST00000444951 PARVAQ9NVD7 372 aa18■□□□□ 0.47
LIME1-202ENST00000444951 DLGAP2Q9P1A6 1054 aa18■□□□□ 0.47
LIME1-202ENST00000444951 CACNA1IQ9P0X4 2223 aa18■□□□□ 0.47
LIME1-202ENST00000444951 C2orf78A6NCI8 922 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 ZNF197O14709 1029 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 TMEM253P0C7T8 217 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 RALAP11233 206 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 KRT3P12035 628 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 NCAM1P13591 858 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 RARGP13631 454 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 ARHGAP15Q53QZ3 475 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 PRSS36Q5K4E3 855 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 GPR158Q5T848 1215 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 DCUN1D2Q6PH85 259 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 SLC26A9Q7LBE3 791 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 DEFB106AQ8N104 65 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 SCML4Q8N228 414 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 MAB21L3Q8N8X9 362 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 C3orf20Q8ND61 904 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 JOSD2Q8TAC2 188 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 RNF139Q8WU17 664 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 MCEEQ96PE7 176 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 KXD1Q9BQD3 176 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 NUP85Q9BW27 656 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 NACA2Q9H009 215 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 CTTNBP2NLQ9P2B4 639 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 NAALADL1Q9UQQ1 740 aa17.99■□□□□ 0.47
LIME1-202ENST00000444951 NCANO14594 1321 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 FRYLO94915 3013 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 MDM4O15151 490 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 HSF2BPO75031 334 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 MOSPD3O75425 235 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 TBX18O95935 607 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 ZDHHC11BP0C7U3 371 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 PPP3CCP48454 512 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 PSEN1P49768 467 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 MAMLD1Q13495 774 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 DCAF6Q58WW2 860 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 C10orf120Q5SQS8 335 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 HECTD3Q5T447 861 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 SYPL2Q5VXT5 272 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 TTC16Q8NEE8 873 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 NKD2Q969F2 451 aaPredicted RBP17.98■□□□□ 0.47
LIME1-202ENST00000444951 CYP2S1Q96SQ9 504 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 POPDC2Q9HBU9 364 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 ABCC13Q9NSE7 274 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.98■□□□□ 0.472e-6■■□□□ 11.6
LIME1-202ENST00000444951 ADGRG1Q9Y653 693 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIME1-202ENST00000444951 ZFP37Q9Y6Q3 630 aaPredicted RBP17.98■□□□□ 0.47
LIME1-202ENST00000444951 SCINQ9Y6U3 715 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 EP300Q09472 2414 aaPredicted RBP17.98■□□□□ 0.47
LIME1-202ENST00000444951 MIA3Q5JRA6 1907 aa17.98■□□□□ 0.47
LIME1-202ENST00000444951 SYNJ2BP-COX16A0A087WUM0 186 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 A0A0U1RQJ8 604 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 RCCD1A6NED2 376 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 SIGLEC16A6NMB1 481 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 TLR5O60602 858 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 DAB1O75553 588 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 CYP1A2P05177 515 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 FYNP06241 537 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 RFC1P35251 1148 aaPredicted RBP17.97■□□□□ 0.47
LIME1-202ENST00000444951 FLT3P36888 993 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 RPL7AP62424 266 aaKnown RBP17.97■□□□□ 0.47
LIME1-202ENST00000444951 EFEMP1Q12805 493 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 PLEKHA7Q6IQ23 1121 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 ARL14EPQ8N8R7 260 aaPredicted RBP17.97■□□□□ 0.47
LIME1-202ENST00000444951 ADAM32Q8TC27 787 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 ATRIPQ8WXE1 791 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 TRIM7Q9C029 511 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 MRPL47Q9HD33 250 aaKnown RBP17.97■□□□□ 0.47
LIME1-202ENST00000444951 AVENQ9NQS1 362 aaPredicted RBP17.97■□□□□ 0.47
LIME1-202ENST00000444951 ASNSD1Q9NWL6 643 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.97■□□□□ 0.47
LIME1-202ENST00000444951 COX16Q9P0S2 106 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 RASAL2Q9UJF2 1139 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 TMEM59LQ9UK28 342 aa17.97■□□□□ 0.47
LIME1-202ENST00000444951 TCRBV5S1A1TA0A578 114 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 COCHO43405 550 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 GLI1P08151 1106 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 CCDC175P0C221 793 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 PDGFRAP16234 1089 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 SCNN1AP37088 669 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 NOP2P46087 812 aaKnown RBP17.96■□□□□ 0.47
LIME1-202ENST00000444951 VAV2P52735 878 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 GSCP56915 257 aaPredicted RBP17.96■□□□□ 0.47
LIME1-202ENST00000444951 STARD6P59095 220 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 MIB1Q86YT6 1006 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 PJA1Q8NG27 643 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 RXFP2Q8WXD0 754 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 BTBD6Q96KE9 485 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 ZSWIM3Q96MP5 696 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 SLC2A13Q96QE2 648 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 SLC22A12Q96S37 553 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 TRIM62Q9BVG3 475 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 SLC46A2Q9BY10 475 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 PLA2G2FQ9BZM2 168 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 LACRTQ9GZZ8 138 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms