RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ALS2CLQ60I27 953 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 PRSS55Q6UWB4 352 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 NT5MQ9NPB1 228 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 GNEQ9Y223 722 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 UBR3Q6ZT12 1888 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 SCNN1BP51168 640 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 C16orf59Q7L2K0 433 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 ANKMY2Q8IV38 441 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 SH3KBP1Q96B97 665 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 RBM22Q9NW64 420 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 COILP38432 576 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 NOMO3P69849 1222 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 FMO1Q01740 532 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 TMEM192Q8IY95 271 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 MAB21L3Q8N8X9 362 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 KREMEN2Q8NCW0 462 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 KREMEN1Q96MU8 473 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 RBM15Q96T37 977 aaKnown RBP eCLIP14.56□□□□□ -0.082e-6■■■■□ 21.5
SMARCA4-204ENST00000444061 EGFL8Q99944 293 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 TSSK1BQ9BXA7 367 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 CAPS2Q9BXY5 557 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 FAM124BQ9H5Z6 455 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 CACYBPQ9HB71 228 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 STXBP5LQ9Y2K9 1186 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 IQCF3P0C7M6 154 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 POLR2EP19388 210 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 AMPD1P23109 780 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 UGP2Q16851 508 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 TIGD5Q53EQ6 642 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 LCLAT1Q6UWP7 414 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 ANKLE1Q8NAG6 615 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 BADQ92934 168 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 TMEM175Q9BSA9 504 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 LRRC1Q9BTT6 524 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 AFF4Q9UHB7 1163 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 NEU2Q9Y3R4 380 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 RBM47A0AV96 593 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 ZNF263O14978 683 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 RFC1P35251 1148 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 FNTAP49354 379 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 RENBPP51606 427 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 ENPEPQ07075 957 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 MEA1Q16626 185 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 C15orf59Q2T9L4 293 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 RAP1GAP2Q684P5 730 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 GET4Q7L5D6 327 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 IRF2BP1Q8IU81 584 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 DENND1CQ8IV53 801 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 BLOC1S5Q8TDH9 187 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 VCXQ9H320 206 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 CDHR5Q9HBB8 845 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 RBM12Q9NTZ6 932 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 AP5Z1O43299 807 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 LUC7L3O95232 432 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 SYTL3Q4VX76 610 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 FAXCQ5TGI0 409 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 ACTL9Q8TC94 416 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 CALML6Q8TD86 181 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 PTPRN2Q92932 1015 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 OR12D3Q9UGF7 316 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 NOVA2Q9UNW9 492 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 CAPN7Q9Y6W3 813 aa14.56□□□□□ -0.08
SMARCA4-204ENST00000444061 C8AP07357 584 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 DSG4Q86SJ6 1040 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 PHF13Q86YI8 300 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 ATG4AQ8WYN0 398 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 SUSD6Q92537 303 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 O00370 1275 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 TYK2P29597 1187 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 ZNF143P52747 638 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 GNGT1P63211 74 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 TBX2Q13207 712 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 RAB42Q8N4Z0 105 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 COG1Q8WTW3 980 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 RIPOR3Q96MK2 946 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 SLC9A7Q96T83 725 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 C2orf49Q9BVC5 232 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 FOXP3Q9BZS1 431 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 XAB2Q9HCS7 855 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 IL23AQ9NPF7 189 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 CRLS1Q9UJA2 301 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 TSR3Q9UJK0 312 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 C2orf81A6NN90 581 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 FNDC3BQ53EP0 1204 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 FRMD8Q9BZ67 464 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 PLAAQ9Y263 795 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 FIS1Q9Y3D6 152 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 ENPP3O14638 875 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 CHEK2O96017 543 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 TGM2P21980 687 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 PCK1P35558 622 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 ZRANB3Q5FWF4 1079 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 REXO1L1PQ8IX06 675 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 CYTH2Q99418 400 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 KLHL14Q9P2G3 628 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 GJD2Q9UKL4 321 aa14.55□□□□□ -0.08
SMARCA4-204ENST00000444061 SERPINF2P08697 491 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 GHRHRQ02643 423 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms