RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MAST4O15021 2626 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 COPAP53621 1224 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 MFAP3P55082 362 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 CLDN10P78369 228 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 TRPC3Q13507 836 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 PTPRNQ16849 979 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 BMT2Q1RMZ1 405 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 FYB2Q5VWT5 728 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 TMPRSS6Q8IU80 811 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 XXYLT1Q8NBI6 393 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 PLEKHO2Q8TD55 490 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 RHBDD1Q8TEB9 315 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 CRELD1Q96HD1 420 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 PIWIL1Q96J94 861 aaKnown RBP15.18■□□□□ 0.02
HMGN1-208ENST00000443046 NUP58Q9BVL2 599 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 MIR1-1HGQ9H1L0 117 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 PCED1AQ9H1Q7 454 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 NMUR1Q9HB89 426 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 OSGEPQ9NPF4 335 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 KBTBD4Q9NVX7 518 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 PLK2Q9NYY3 685 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 EIF2B4Q9UI10 523 aaKnown RBP15.18■□□□□ 0.02
HMGN1-208ENST00000443046 SCML2Q9UQR0 700 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 SLCO1B1Q9Y6L6 691 aa15.18■□□□□ 0.02
HMGN1-208ENST00000443046 HHLA1C9JL84 531 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 CLIC2O15247 247 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 ZIC2O95409 532 aaPredicted RBP15.17■□□□□ 0.02
HMGN1-208ENST00000443046 KLKB1P03952 638 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 PLA2G4AP47712 749 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 CSNK1EP49674 416 aaKnown RBP15.17■□□□□ 0.02
HMGN1-208ENST00000443046 GOLGA8FQ08AF8 430 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 GOLGA8DPQ0D2H9 430 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 GEN1Q17RS7 908 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 C8orf34Q49A92 452 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 CNNM4Q6P4Q7 775 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 GPRIN1Q7Z2K8 1008 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 ACOT1Q86TX2 421 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 C12orf56Q8IXR9 622 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 PDCD7Q8N8D1 485 aaKnown RBP15.17■□□□□ 0.02
HMGN1-208ENST00000443046 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 SLC2A14Q8TDB8 520 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 SIPA1Q96FS4 1042 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 TNMDQ9H2S6 317 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.17■□□□□ 0.02
HMGN1-208ENST00000443046 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.17■□□□□ 0.02
HMGN1-208ENST00000443046 PTPRQQ9UMZ3 2332 aa15.17■□□□□ 0.02
HMGN1-208ENST00000443046 ZNF462Q96JM2 2506 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 A0A1B0GVT2 93 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 EIF4E1BA6NMX2 242 aaKnown RBP15.16■□□□□ 0.02
HMGN1-208ENST00000443046 E9PAM4 449 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 TK2O00142 265 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 CYP26A1O43174 497 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 TNFSF14O43557 240 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 STC2O76061 302 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 CCDC130P13994 396 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 AFF3P51826 1226 aaKnown RBP15.16■□□□□ 0.02
HMGN1-208ENST00000443046 MAP3K7CLP57077 242 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 EHHADHQ08426 723 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 SUZ12Q15022 739 aaKnown RBP15.16■□□□□ 0.02
HMGN1-208ENST00000443046 E2F4Q16254 413 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 KIF19Q2TAC6 998 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 ZNF667Q5HYK9 610 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 PRCCQ92733 491 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-208ENST00000443046 BHMTQ93088 406 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 UBL7Q96S82 380 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-208ENST00000443046 DNMT3LQ9UJW3 386 aa15.16■□□□□ 0.02
HMGN1-208ENST00000443046 A0A1W2PQH9 124 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 MDM4O15151 490 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 PCDHGA12O60330 932 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 C1QL1O75973 258 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 VNN1O95497 513 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 C4BPAP04003 597 aaKnown RBP15.15■□□□□ 0.02
HMGN1-208ENST00000443046 RARGP13631 454 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 CASP4P49662 377 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 CYP2J2P51589 502 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 ZNF234Q14588 700 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 SLC39A14Q15043 492 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 ZNF699Q32M78 642 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 FAM173BQ6P4H8 233 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 CLEC20AQ6ZU45 233 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 UNC93AQ86WB7 457 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 C12orf29Q8N999 325 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 LRRC27Q9C0I9 530 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 ELOVL2Q9NXB9 296 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 HMGXB4Q9UGU5 601 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 NUDT5Q9UKK9 219 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.15■□□□□ 0.02
HMGN1-208ENST00000443046 ZNF510Q9Y2H8 683 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 PCDHA5Q9Y5H7 936 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 SNX11Q9Y5W9 270 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 UBE4BO95155 1302 aa15.15■□□□□ 0.02
HMGN1-208ENST00000443046 FAM149AA5PLN7 773 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 PAPSS1O43252 624 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-208ENST00000443046 SYNCRIPO60506 623 aaKnown RBP15.14■□□□□ 0.01
HMGN1-208ENST00000443046 PRKCHP24723 683 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 CHKAP35790 457 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 NDST1P52848 882 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 AP3M2P53677 418 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms