RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 ZYXQ15942 572 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 TIMM50Q3ZCQ8 353 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 FAM98BQ52LJ0 330 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 TFDP3Q5H9I0 405 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 FAM102AQ5T9C2 384 aaPredicted RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 EMC10Q5UCC4 262 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 TMEM214Q6NUQ4 689 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 PAGE2Q7Z2X7 111 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 CCDC28AQ8IWP9 274 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 BPIFB6Q8NFQ5 453 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 SLC4A5Q9BY07 1137 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ROGDIQ9GZN7 287 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 VTI1BQ9UEU0 232 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 PXDNLA1KZ92 1463 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 FAM20BO75063 409 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 IDO1P14902 403 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 MAGP20916 626 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 CHKAP35790 457 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 ABL2P42684 1182 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 UBXN2AP68543 259 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 NFYCQ13952 458 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 QPRTQ15274 297 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 FUT11Q495W5 492 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 ZNF667Q5HYK9 610 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 DENND1BQ6P3S1 775 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 HPS6Q86YV9 775 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 IQCF2Q8IXL9 164 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 RASGEF1CQ8N431 466 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 SPRTNQ9H040 489 aaPredicted RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 LRRC19Q9H756 370 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 CCSER2Q9H7U1 834 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 DYRK4Q9NR20 520 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 ITGA11Q9UKX5 1188 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 CNTNAP5Q8WYK1 1306 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 SLC16A4O15374 487 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 PHKG2P15735 406 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 BTDP43251 543 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 PSMC6P62333 389 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 MTMR2Q13614 643 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 ZNF544Q6NX49 715 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 ARCQ7LC44 396 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 CORO1BQ9BR76 489 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 RHOBTB2Q9BYZ6 727 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 EPB41L1Q9H4G0 881 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 CRNNQ9UBG3 495 aaPredicted RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 UBA2Q9UBT2 640 aaPredicted RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 SRP68Q9UHB9 627 aaKnown RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 ING4Q9UNL4 249 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 ILVBLA1L0T0 632 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 DBTP11182 482 aaKnown RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 CDK9P50750 372 aaKnown RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 RAB25P57735 213 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 KLRC3Q07444 240 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 PUDPQ08623 228 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 COBLL1Q53SF7 1204 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 MIIPQ5JXC2 388 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 MZT2BQ6NZ67 158 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 KLHL35Q6PF15 583 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 USP17L6PQ6QN14 398 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 ATG9AQ7Z3C6 839 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 PCDH20Q8N6Y1 951 aaKnown RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 C7orf31Q8N865 590 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 SLC7A3Q8WY07 619 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 ZNF669Q96BR6 464 aaPredicted RBP10.6□□□□□ -0.71
LIN54-202ENST00000442461 ULK4Q96C45 1275 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 MSTO1Q9BUK6 570 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 SLC25A23Q9BV35 468 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 NCKIPSDQ9NZQ3 722 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 CDH22Q9UJ99 828 aa10.6□□□□□ -0.71
LIN54-202ENST00000442461 PIPSLA2A3N6 862 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 K7ERI5 159 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 UFL1O94874 794 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 CYP2C9P11712 490 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 CD97P48960 835 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 PURAQ00577 322 aaKnown RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 GRB10Q13322 594 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 TAF12Q16514 161 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 RAB43Q86YS6 212 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 KBTBD8Q8NFY9 601 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 RNF145Q96MT1 663 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 THUMPD3Q9BV44 507 aaKnown RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 MAGEB5Q9BZ81 275 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 IGSF9Q9P2J2 1179 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 MRC2Q9UBG0 1479 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 TFECO14948 347 aaPredicted RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 EIF3DO15371 548 aaKnown RBP eCLIP10.59□□□□□ -0.71
LIN54-202ENST00000442461 PRKD3O94806 890 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms