RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 CTDSPL2Q05D32 466 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CDK18Q07002 472 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 KCNH2Q12809 1159 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 NONOQ15233 471 aaKnown RBP eCLIP2.87□□□□□ -1.95
LIG4-203ENST00000442234 SF3B3Q15393 1217 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 PPP2R5EQ16537 467 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SLC10A5Q5PT55 438 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PPM1LQ5SGD2 360 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 KSR2Q6VAB6 950 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SPRED2Q7Z698 418 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 METTL16Q86W50 562 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 ECHDC2Q86YB7 292 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GRAMD1CQ8IYS0 662 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SLC25A41Q8N5S1 370 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ANKRD53Q8N9V6 530 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SPATA5Q8NB90 893 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CCDC124Q96CT7 223 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 TMEM79Q9BSE2 394 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 BTBD10Q9BSF8 475 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 THTPAQ9BU02 230 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 HERC2P3Q9BVR0 1158 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 MUC3BQ9H195 1237 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 MTIF3Q9H2K0 278 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 CPVLQ9H3G5 476 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 RNPEPQ9H4A4 650 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 MMRN2Q9H8L6 949 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 WASH6PQ9NQA3 447 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 EVA1BQ9NVM1 165 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 KIAA1522Q9P206 1035 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 MRPS7Q9Y2R9 242 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 PCDHGA11Q9Y5H2 935 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PCDHA13Q9Y5I0 950 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ZNF536O15090 1300 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 AKAP6Q13023 2319 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 TOPAZ1Q8N9V7 1692 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ALS2Q96Q42 1657 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 GRID2IPA4D2P6 1211 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PGRMC1O00264 195 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 C2CD2LO14523 706 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PER2O15055 1255 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 NCAM2O15394 837 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 YKT6O15498 198 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A9O60656 530 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 DEAF1O75398 565 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 OR5F1O95221 314 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PLEKHA8P1O95397 391 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 IFNA14P01570 189 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 FAM58BPP0C7Q3 252 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SRGAP2CP0DJJ0 459 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SRGAP2BP0DMP2 458 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PDE6AP16499 860 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ZNF3P17036 446 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A6P19224 532 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A1P22309 533 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A4P22310 534 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ALAS2P22557 587 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 GRK2P25098 689 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PCSK6P29122 969 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CDC27P30260 824 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A3P35503 534 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A5P35504 534 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TRIM23P36406 574 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 STAT3P40763 770 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 NPTX2P47972 431 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 EPHB1P54762 984 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CTAG1AP78358 180 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TMPRSS15P98073 1019 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PLIN5Q00G26 463 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CALCOCO2Q13137 446 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PAK1Q13153 545 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TOB2Q14106 344 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 GIT2Q14161 759 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 EPHA7Q15375 998 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TRIP13Q15645 432 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 MAPK11Q15759 364 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CNGA2Q16280 664 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 MOGQ16653 247 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 MAPK6Q16659 721 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ZNF829Q3KNS6 432 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 CCDC14Q49A88 953 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ALFQ53S48 1182 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ARSHQ5FYA8 562 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TMEM31Q5JXX7 168 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TTI2Q6NXR4 508 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CDC42EP5Q6NZY7 148 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 METTL2BQ6P1Q9 378 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 LVRNQ6Q4G3 990 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 APOA5Q6Q788 366 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UNC5DQ6UXZ4 953 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ZNF600Q6ZNG1 722 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CYB5R4Q7L1T6 521 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 OTOP3Q7RTS5 596 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PCGF5Q86SE9 256 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PRUNE1Q86TP1 453 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 AACSQ86V21 672 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CRIPAKQ8N1N5 446 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 AFAP1L2Q8N4X5 818 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CSGALNACT2Q8N6G5 542 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 POU5F2Q8N7G0 328 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms