RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 RARAP10276 462 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 TCF4P15884 667 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 TFE3P19532 575 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-217ENST00000441756 CCR1P32246 355 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 PTPN7P35236 360 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 ATP5C1P36542 298 aaKnown RBP16.54■□□□□ 0.24
MCF2L-217ENST00000441756 CXCR3P49682 368 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF135P52742 658 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-217ENST00000441756 KRT81Q14533 505 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 HECTD3Q5T447 861 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 DCAF12L1Q5VU92 463 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 KLHDC10Q6PID8 442 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 FAM131BQ86XD5 332 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 CREG2Q8IUH2 290 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 KCTD6Q8NC69 237 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 HSPH1Q92598 858 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 MRPS31Q92665 395 aaKnown RBP16.54■□□□□ 0.24
MCF2L-217ENST00000441756 SNRNP25Q9BV90 132 aaKnown RBP16.54■□□□□ 0.24
MCF2L-217ENST00000441756 WDCPQ9H6R7 721 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 PIGVQ9NUD9 493 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.54■□□□□ 0.24
MCF2L-217ENST00000441756 OSER1Q9NX31 292 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 AP4E1Q9UPM8 1137 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 TLR6Q9Y2C9 796 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 HCFC2Q9Y5Z7 792 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 CEP290O15078 2479 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF638Q14966 1978 aaKnown RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 GOLGA6L10A0A0M3HER8 536 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 CTAGE15A4D2H0 777 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF840PA6NDX5 716 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF487B1APH4 448 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF185O15231 689 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 SLU7O95391 586 aaKnown RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 APOEP02649 317 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 CTAGE8P0CG41 777 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 PYGMP11217 842 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 EPCAMP16422 314 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 PFKLP17858 780 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 IL1R2P27930 398 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 NRIP1P48552 1158 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 TUBB4BP68371 445 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 PITX1P78337 314 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 SCAPQ12770 1279 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF211Q13398 564 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 PPP2R5DQ14738 602 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 TRIP4Q15650 581 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 PPP2R5EQ16537 467 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 SMTNL2Q2TAL5 461 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 ACBD5Q5T8D3 534 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 CTAGE6Q86UF2 777 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 CTAGE4Q8IX94 777 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 CMASQ8NFW8 434 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 ADAM32Q8TC27 787 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 CASP10Q92851 521 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 PEBP4Q96S96 227 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 NSUN3Q9H649 340 aaKnown RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.53■□□□□ 0.243e-6■■■□□ 17.4
MCF2L-217ENST00000441756 MARCH2Q9P0N8 246 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 SLC12A6Q9UHW9 1150 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 RASAL2Q9UJF2 1139 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 DNMT3LQ9UJW3 386 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 EFR3BQ9Y2G0 817 aa16.53■□□□□ 0.24
MCF2L-217ENST00000441756 HBS1LQ9Y450 684 aaKnown RBP16.53■□□□□ 0.24
MCF2L-217ENST00000441756 CLUHO75153 1309 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 CCL16O15467 120 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 FGGP02679 453 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 PTPN2P17706 415 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 KDELR1P24390 212 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 CDH6P55285 790 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 TBX4P57082 545 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 ITIH3Q06033 890 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 RING1Q06587 406 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 EFEMP1Q12805 493 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 DPYSL2Q16555 572 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 LONRF2Q1L5Z9 754 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 TFDP3Q5H9I0 405 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 KCNT1Q5JUK3 1230 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 SPOCD1Q6ZMY3 1216 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 CYP4V2Q6ZWL3 525 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-217ENST00000441756 RBM23Q86U06 439 aaKnown RBP16.52■□□□□ 0.24
MCF2L-217ENST00000441756 RNF25Q96BH1 459 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF670Q9BS34 389 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 CALN1Q9BXU9 219 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 DHX35Q9H5Z1 703 aaKnown RBP16.52■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF576Q9H609 170 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 SFXN1Q9H9B4 322 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 PRDM16Q9HAZ2 1276 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 WDR6Q9NNW5 1121 aaKnown RBP16.52■□□□□ 0.24
MCF2L-217ENST00000441756 LMCD1Q9NZU5 365 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 RCOR3Q9P2K3 495 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-217ENST00000441756 ZMYM5Q9UJ78 669 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 FZD10Q9ULW2 581 aa16.52■□□□□ 0.24
MCF2L-217ENST00000441756 MTCL1Q9Y4B5 1905 aaKnown RBP16.52■□□□□ 0.23
MCF2L-217ENST00000441756 EPOPA6NHQ4 379 aa16.51■□□□□ 0.23
MCF2L-217ENST00000441756 PER2O15055 1255 aa16.51■□□□□ 0.23
MCF2L-217ENST00000441756 F11P03951 625 aa16.51■□□□□ 0.23
MCF2L-217ENST00000441756 DDX6P26196 483 aaKnown RBP eCLIP16.51■□□□□ 0.23
MCF2L-217ENST00000441756 GABRR2P28476 465 aa16.51■□□□□ 0.23
MCF2L-217ENST00000441756 ADRA1BP35368 520 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms