RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 TAF3Q5VWG9 929 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 TMPRSS9Q7Z410 1059 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLC15A3Q8IY34 581 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 ADSSL1Q8N142 457 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 C11orf44Q8N8P7 122 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SNX21Q969T3 373 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SH3KBP1Q96B97 665 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 RADILQ96JH8 1075 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLX1AQ9BQ83 275 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 PDCL3Q9H2J4 239 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 TBC1D14Q9P2M4 693 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 RIMKLBQ9ULI2 386 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SNX14Q9Y5W7 946 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 LOC105369274A0A096LPK9 316 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 LOC102723532A0A0G2JNH3 316 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 PMS2P1A4D2B8 440 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SAC3D1A6NKF1 404 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 C19orf81C9J6K1 198 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 TNPO2O14787 897 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SEPT4O43236 478 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SEMA7AO75326 666 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 UBL4AP11441 157 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ALADP13716 330 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 PRKAR1BP31321 381 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 PBX1P40424 430 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 HARS2P49590 506 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 TIAL1Q01085 375 aaKnown RBP eCLIP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 MPP3Q13368 585 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 WTAPQ15007 396 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SLC30A6Q6NXT4 461 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 DRICH1Q6PGQ1 229 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 C16orf87Q6PH81 154 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ELOA2Q8IYF1 753 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 OR4N4Q8N0Y3 316 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 FSIP1Q8NA03 581 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 CUL5Q93034 780 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 HAPLN3Q96S86 360 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 XPO4Q9C0E2 1151 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 C12orf65Q9H3J6 166 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 CEP72Q9P209 647 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 CNOT7Q9UIV1 285 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SMG5Q9UPR3 1016 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SORCS3Q9UPU3 1222 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SSX2IPQ9Y2D8 614 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 A0A1B0GTL3 188 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 GTPBP1O00178 669 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 CTIFO43310 598 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 DKC1O60832 514 aaKnown RBP eCLIP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ADRB2P07550 413 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 HSPA1AP0DMV8 641 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 HSPA1BP0DMV9 641 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 LAMP2P13473 410 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 GNAT2P19087 354 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ITGALP20701 1170 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 DRD1P21728 446 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ACSL1P33121 698 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ARL3P36405 182 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 HADHAP40939 763 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 UBA7P41226 1012 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 NLRP5P59047 1200 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 CREB5Q02930 508 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 MAMLD1Q13495 774 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ACVR2BQ13705 512 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ACOX1Q15067 660 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZNF569Q5MCW4 686 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 CBWD5Q5RIA9 395 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 LIPMQ5VYY2 423 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 METTL25Q8N6Q8 603 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 ANKRD44Q8N8A2 993 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 APPL2Q8NEU8 664 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 OR52N2Q8NGI0 321 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 NFKBIDQ8NI38 313 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 METTL6Q8TCB7 284 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SLC2A12Q8TD20 617 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 USP6NLQ92738 828 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 REXO5Q96IC2 774 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 PNKPQ96T60 521 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 PAIP2Q9BPZ3 127 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 PAAF1Q9BRP4 392 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 MXD3Q9BW11 206 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 TLR8Q9NR97 1041 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 SERTAD3Q9UJW9 196 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 GDAQ9Y2T3 454 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 PCDHA10Q9Y5I2 948 aa4.46□□□□□ -1.7
CDC42BPA-207ENST00000441725 RUSC2Q8N2Y8 1516 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 C9orf118A6NHY6 69 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 AGAP5A6NIR3 686 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 AGAP14A8MT82 685 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 B4GALT4O60513 344 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 TUBB4AP04350 444 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 MGAT1P26572 445 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 CD6P30203 668 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 PPIFP30405 207 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZNF131P52739 623 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 RPS3AP61247 264 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 IFI35P80217 286 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 MC1RQ01726 317 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 CAMK1Q14012 370 aa4.45□□□□□ -1.7
CDC42BPA-207ENST00000441725 E2F2Q14209 437 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms