RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 PRSS33Q8NF86 280 aa18.83■□□□□ 0.6
CPSF4-205ENST00000440514 ADAM32Q8TC27 787 aa18.83■□□□□ 0.6
CPSF4-205ENST00000440514 PLD4Q96BZ4 506 aa18.83■□□□□ 0.6
CPSF4-205ENST00000440514 PCDHB18PQ96TA0 734 aa18.83■□□□□ 0.6
CPSF4-205ENST00000440514 NELL2Q99435 816 aa18.83■□□□□ 0.6
CPSF4-205ENST00000440514 XPO4Q9C0E2 1151 aaKnown RBP18.83■□□□□ 0.6
CPSF4-205ENST00000440514 POPDC2Q9HBU9 364 aa18.83■□□□□ 0.6
CPSF4-205ENST00000440514 FBRSL1Q9HCM7 1045 aaKnown RBP18.83■□□□□ 0.6
CPSF4-205ENST00000440514 HBS1LQ9Y450 684 aaKnown RBP18.83■□□□□ 0.6
CPSF4-205ENST00000440514 MYOFQ9NZM1 2061 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 CAPN9O14815 690 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 CYP1A1P04798 512 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-205ENST00000440514 YWHAZP63104 245 aaKnown RBP18.82■□□□□ 0.6
CPSF4-205ENST00000440514 PITX1P78337 314 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-205ENST00000440514 TRIP4Q15650 581 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-205ENST00000440514 TOGARAM2Q6ZUX3 1019 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 ERICH1Q86X53 443 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 TMEM25Q86YD3 366 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 DENND1CQ8IV53 801 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 CLDN23Q96B33 292 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 P2RY13Q9BPV8 354 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 TRIM62Q9BVG3 475 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 DCLK3Q9C098 648 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 LMAN1LQ9HAT1 526 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 SPHK2Q9NRA0 654 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 SEPT11Q9NVA2 429 aaKnown RBP18.82■□□□□ 0.6
CPSF4-205ENST00000440514 AGO1Q9UL18 857 aaKnown RBP18.82■□□□□ 0.6
CPSF4-205ENST00000440514 MYO6Q9UM54 1294 aa18.82■□□□□ 0.6
CPSF4-205ENST00000440514 TRDMT1O14717 391 aaKnown RBP18.81■□□□□ 0.6
CPSF4-205ENST00000440514 HSF2BPO75031 334 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 DAB1O75553 588 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 TPM3P06753 285 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 CHRNB1P11230 501 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 GALK1P51570 392 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 SNX16P57768 344 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 AMPD2Q01433 879 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 SLC6A3Q01959 620 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 ASIC2Q16515 512 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 ANO4Q32M45 955 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 TMEM196Q5HYL7 178 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 EFHC1Q5JVL4 640 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 MMS22LQ6ZRQ5 1243 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 Q6ZS52 159 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 TPGS1Q6ZTW0 290 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 BEND5Q7L4P6 421 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 SLC26A9Q7LBE3 791 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 XYLT1Q86Y38 959 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 DEFB106AQ8N104 65 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 SLC30A5Q8TAD4 765 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 OLIG1Q8TAK6 271 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 CD101Q93033 1021 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 SLC2A13Q96QE2 648 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 AGPAT1Q99943 283 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 ASNSD1Q9NWL6 643 aa18.81■□□□□ 0.6
CPSF4-205ENST00000440514 GOLGA8SH3BPF8 625 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 NCAM2O15394 837 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 HOXC11O43248 304 aaPredicted RBP18.8■□□□□ 0.6
CPSF4-205ENST00000440514 GALR2O43603 387 aaPredicted RBP18.8■□□□□ 0.6
CPSF4-205ENST00000440514 EGFP01133 1207 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 IGLV3-27P01718 113 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 RPS9P46781 194 aaKnown RBP18.8■□□□□ 0.6
CPSF4-205ENST00000440514 GABRB2P47870 512 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 SLC6A11P48066 632 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 TBX4P57082 545 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 GAD2Q05329 585 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 KDSRQ06136 332 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 MESP2Q0VG99 397 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 GRSF1Q12849 480 aaKnown RBP eCLIP18.8■□□□□ 0.6
CPSF4-205ENST00000440514 CCINQ13939 588 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 LRRC32Q14392 662 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 CLEC16AQ2KHT3 1053 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 DCAF6Q58WW2 860 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 FIGNQ5HY92 759 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 TRIM72Q6ZMU5 477 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 IRF2BP2Q7Z5L9 587 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 MSANTD4Q8NCY6 345 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 EZH1Q92800 747 aaPredicted RBP18.8■□□□□ 0.6
CPSF4-205ENST00000440514 BHMTQ93088 406 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 C18orf8Q96DM3 657 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 P2RY11Q96G91 374 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 SERPINB11Q96P15 392 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 C11orf70Q9BRQ4 267 aa18.8■□□□□ 0.6
CPSF4-205ENST00000440514 NEDD8-MDP1E9PL57 170 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 IRAK2O43187 625 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 GLI1P08151 1106 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 MAGEA9P43362 315 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 HARS2P49590 506 aaKnown RBP18.79■□□□□ 0.6
CPSF4-205ENST00000440514 FAM102AQ5T9C2 384 aaPredicted RBP18.79■□□□□ 0.6
CPSF4-205ENST00000440514 SFMBT2Q5VUG0 894 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 ZDHHC17Q8IUH5 632 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 NAT16Q8N8M0 369 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 FCRL2Q96LA5 508 aaPredicted RBP18.79■□□□□ 0.6
CPSF4-205ENST00000440514 SYT11Q9BT88 431 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 BBS2Q9BXC9 721 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 EDEM3Q9BZQ6 932 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 CHRDQ9H2X0 955 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 FAM204AQ9H8W3 233 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 ZNF510Q9Y2H8 683 aa18.79■□□□□ 0.6
CPSF4-205ENST00000440514 SYNJ2BP-COX16A0A087WUM0 186 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 A0A1W2PQJ5 194 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms