RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 TMEM191CA6NGB0 347 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ATP8B1O43520 1251 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 GJB6O95452 261 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ERBB2P04626 1255 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 DESP17661 470 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 PSMA2P25787 234 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 GABRR2P28476 465 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 PEX5P50542 639 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 MAP3K7CLP57077 242 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CYP4F8P98187 520 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SLC7A5Q01650 507 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TEAD2Q15562 447 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TAF12Q16514 161 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ODF2Q5BJF6 829 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ZFYVE27Q5T4F4 411 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ARHGAP17Q68EM7 881 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 GAREM2Q75VX8 874 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 OTOP3Q7RTS5 596 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 GJD3Q8N144 294 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 KHSRPQ92945 711 aaKnown RBP eCLIP15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 MCRS1Q96EZ8 462 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SMARCD1Q96GM5 515 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 C8orf48Q96LL4 319 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ZSWIM3Q96MP5 696 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CPXM1Q96SM3 734 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 HNRNPABQ99729 332 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 DMAP1Q9NPF5 467 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ST7Q9NRC1 585 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 METTL5Q9NRN9 209 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CDH7Q9ULB5 785 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 NR2E1Q9Y466 385 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 OBSL1O75147 1896 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TCRBV5S1A1TA0A578 114 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TRIM66O15016 1216 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 PHF2O75151 1096 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ASGR2P07307 311 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 FAM200BP0CF97 657 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CSH1P0DML2 217 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CSH2P0DML3 217 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 KRT3P12035 628 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TNFRSF8P28908 595 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 GPD2P43304 727 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TNNT3P45378 269 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 BCAT1P54687 386 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 IFRD2Q12894 506 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 PPP1R15BQ5SWA1 713 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CLEC20AQ6ZU45 233 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 GPRIN1Q7Z2K8 1008 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 MAATS1Q7Z4T9 603 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TMEM150AQ86TG1 271 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 XYLT1Q86Y38 959 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SLC13A5Q86YT5 568 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CCDC50Q8IVM0 306 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SPATA17Q96L03 361 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 RUNDC3BQ96NL0 473 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 LIMD1Q9UGP4 676 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CYTH4Q9UIA0 394 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 PATJQ8NI35 1801 aa15.19■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SIGLEC16A6NMB1 481 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 RAD51CO43502 376 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ZRANB2O95218 330 aaKnown RBP eCLIP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 KRT1P04264 644 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 PYGMP11217 842 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 GABRB2P47870 512 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 RPL7AP62424 266 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 MRPS25P82663 173 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 GUCY2DQ02846 1103 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 BST2Q10589 180 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 FAM102AQ5T9C2 384 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 OR6B2Q6IFH4 312 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 HDXQ7Z353 690 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ADAT2Q7Z6V5 191 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TTC30AQ86WT1 665 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 RNF135Q8IUD6 432 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 KATNAL2Q8IYT4 538 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ZDHHC14Q8IZN3 488 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 NIPA2Q8N8Q9 360 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SCAMP5Q8TAC9 235 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 RSAD2Q8WXG1 361 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ACSF2Q96CM8 615 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 RBM41Q96IZ5 413 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 DDX47Q9H0S4 455 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ATXN3LQ9H3M9 355 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ACBD3Q9H3P7 528 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SMOC2Q9H3U7 446 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ZNF446Q9NWS9 450 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 EPS15L1Q9UBC2 864 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 RASAL2Q9UJF2 1139 aa15.18■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ZNF638Q14966 1978 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 HHLA1C9JL84 531 aa15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 TULP2O00295 520 aa15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 DLL1O00548 723 aa15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 ZNF197O14709 1029 aa15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 SART1O43290 800 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 F11P03951 625 aa15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 LAMP2P13473 410 aa15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 NPR3P17342 541 aa15.17■□□□□ 0.02
TNFRSF1A-204ENST00000440083 CHRNA3P32297 505 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms