RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZNF587Q96SQ5 575 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 PSMB7Q99436 277 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 SYT15Q9BQS2 421 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMEM175Q9BSA9 504 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 MED10Q9BTT4 135 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 TRIM62Q9BVG3 475 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 PARD6BQ9BYG5 372 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 OSBPL7Q9BZF2 842 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 SMG9Q9H0W8 520 aaKnown RBP4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 RASSF4Q9H2L5 321 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 GOLPH3Q9H4A6 298 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 DPEP3Q9H4B8 488 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 C11orf49Q9H6J7 331 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 GOLGA2P5Q9HBQ8 144 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 FAM49BQ9NUQ9 324 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMEM39AQ9NV64 488 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 TBC1D13Q9NVG8 400 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 DDX43Q9NXZ2 648 aaKnown RBP4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 FRRS1LQ9P0K9 344 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 CHORDC1Q9UHD1 332 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 FEZ2Q9UHY8 353 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 CYTH4Q9UIA0 394 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMEM59LQ9UK28 342 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 RAB21Q9UL25 225 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 EFR3BQ9Y2G0 817 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 V9GYY5 206 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 SCN5AQ14524 2016 aa4.16□□□□□ -1.74
HMGB1P37-201ENST00000439613 FNDC1Q4ZHG4 1894 aaPredicted RBP4.15□□□□□ -1.74
HMGB1P37-201ENST00000439613 OR6C75A6NL08 312 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 C2CD4BA6NLJ0 364 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 METTL12A8MUP2 240 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 E5RJQ4 531 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 F8VP50 259 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 H7C4K7 107 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 FSCN2O14926 492 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 KIAA0355O15063 1070 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRPSAP2O60256 369 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 LILRB5O75023 590 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 HSF2BPO75031 334 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 ATP2C2O75185 946 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TADA2AO75478 443 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TJP3O95049 919 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TIMP1P01033 207 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 AMHP03971 560 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PFKMP08237 780 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 CLTBP09497 229 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 RHOXF2BP0C7M4 288 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PYGMP11217 842 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCDC130P13994 396 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PDGFRAP16234 1089 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 HOXB4P17483 251 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 GPD1P21695 349 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TNFRSF8P28908 595 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SDC4P31431 198 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 CHRNA3P32297 505 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 CYP2C18P33260 490 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PTPN9P43378 593 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 OR1G1P47890 313 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 RGS7P49802 495 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 AFF1P51825 1210 aaKnown RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 RPL7AP62424 266 aaKnown RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SNRPNP63162 240 aaKnown RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 LMNB2Q03252 620 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 YWHAHQ04917 246 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 C2orf54Q08AI8 447 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SMARCB1Q12824 385 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 CUL1Q13616 776 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 DHX34Q14147 1143 aaKnown RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 GPNMBQ14956 572 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PDK2Q15119 407 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 NFE2Q16621 373 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PTPROQ16827 1216 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRIM60Q495X7 471 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 BOLA3Q53S33 107 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 C2CD6Q53TS8 623 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 MDH1BQ5I0G3 518 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM102AQ5T9C2 384 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 DCAF12L1Q5VU92 463 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PEAR1Q5VY43 1037 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM171BQ6P995 826 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TMCO3Q6UWJ1 677 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 ADAMTSL4Q6UY14 1074 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 LINC00114Q6XXX2 140 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM183BPQ6ZVS7 135 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SYDE1Q6ZW31 735 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC26A9Q7LBE3 791 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PHLDB2Q86SQ0 1253 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 VSIG1Q86XK7 387 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF280BQ86YH2 543 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC13A5Q86YT5 568 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SPATA2LQ8IUW3 424 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCDC50Q8IVM0 306 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 COLGALT2Q8IYK4 626 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 FUKQ8N0W3 1084 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SIX6OS1Q8N1H7 587 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SCML4Q8N228 414 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TMEM199Q8N511 208 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms