RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 IPO4Q8TEX9 1081 aaKnown RBP10.94□□□□□ -0.66
MCF2L-216ENST00000439475 EDEM1Q92611 657 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 NELL1Q92832 810 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 WBP2Q969T9 261 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 DDX50Q9BQ39 737 aaKnown RBP10.94□□□□□ -0.66
MCF2L-216ENST00000439475 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 STK33Q9BYT3 514 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 SYNCQ9H7C4 482 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 PLCB1Q9NQ66 1216 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 MARK1Q9P0L2 795 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 LIMA1Q9UHB6 759 aaKnown RBP10.94□□□□□ -0.66
MCF2L-216ENST00000439475 SFMBT1Q9UHJ3 866 aa10.94□□□□□ -0.66
MCF2L-216ENST00000439475 LRRC10BA6NIK2 292 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 NEDD8-MDP1E9PL57 170 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 ZBTB24O43167 697 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-216ENST00000439475 GREM1O60565 184 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 LILRB5O75023 590 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 TULP3O75386 442 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 LATS1O95835 1130 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 TYRP14679 529 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 UCHL3P15374 230 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 APBA1Q02410 837 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 TRIP4Q15650 581 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-216ENST00000439475 C2orf27AQ580R0 203 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 EFHC1Q5JVL4 640 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 EOGTQ5NDL2 527 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 NUGGCQ68CJ6 796 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 GRAMD4Q6IC98 578 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 SDE2Q6IQ49 451 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 MSANTD2Q6P1R3 559 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 Q6ZNB5 142 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 BEND5Q7L4P6 421 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 BHLHA9Q7RTU4 235 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 FAM71AQ8IYT1 594 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 TMEM35BQ8NCS4 154 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 MSANTD4Q8NCY6 345 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 NEK11Q8NG66 645 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 PPP1R13BQ96KQ4 1090 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 SERPINB11Q96P15 392 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 SPAG5Q96R06 1193 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 BPIFA3Q9BQP9 254 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-216ENST00000439475 DNAJC17Q9NVM6 304 aaKnown RBP10.93□□□□□ -0.66
MCF2L-216ENST00000439475 SLC12A6Q9UHW9 1150 aa10.93□□□□□ -0.66
MCF2L-216ENST00000439475 PRR23AA6NEV1 266 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 K7EQS6 105 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 K7ESF4 209 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 CACNG3O60359 315 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 ALDH1A2O94788 518 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 KLKB1P03952 638 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 GLI1P08151 1106 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 GBP1P32455 592 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 CLCN1P35523 988 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 TIE1P35590 1138 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 SLC11A2P49281 568 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 FNTBP49356 437 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 DGKGP49619 791 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 SEC13P55735 322 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 TBX4P57082 545 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 YWHAZP63104 245 aaKnown RBP10.92□□□□□ -0.66
MCF2L-216ENST00000439475 TPM4P67936 248 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 UBXN1Q04323 297 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 KDSRQ06136 332 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 PDCLQ13371 301 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 DMC1Q14565 340 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 KLHL40Q2TBA0 621 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 SKOR2Q2VWA4 1001 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-216ENST00000439475 GAB4Q2WGN9 574 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 ANO6Q4KMQ2 910 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 MPPE1Q53F39 396 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 NAIF1Q69YI7 327 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-216ENST00000439475 OR6B2Q6IFH4 312 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 ASCL5Q7RTU5 278 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 WDR5BQ86VZ2 330 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 ZDHHC17Q8IUH5 632 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 ETFBKMTQ8IXQ9 262 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 ZNF557Q8N988 423 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-216ENST00000439475 TERB1Q8NA31 727 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 USP33Q8TEY7 942 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 DDI1Q8WTU0 396 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 UCMAQ8WVF2 138 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 AZIN2Q96A70 460 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 HINFPQ9BQA5 517 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 POPDC2Q9HBU9 364 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 POLMQ9NP87 494 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-216ENST00000439475 ACP6Q9NPH0 428 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 AGO1Q9UL18 857 aaKnown RBP10.92□□□□□ -0.66
MCF2L-216ENST00000439475 FHOD1Q9Y613 1164 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 FANCMQ8IYD8 2048 aa10.92□□□□□ -0.66
MCF2L-216ENST00000439475 TYW5A2RUC4 315 aaKnown RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 E5RJQ4 531 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 PAPSS1O43252 624 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 GABBR2O75899 941 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 APBB3O95704 486 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 CCDC172P0C7W6 258 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 TDGF1P13385 188 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 CYP11B1P15538 503 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 STAT1P42224 750 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 ZNF165P49910 485 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms