RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KIAA1551Q9HCM1 1747 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 TCRBV7S2A1N4TA0A589 114 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 CFLARO15519 480 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 SEPT4O43236 478 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 GRK4P32298 578 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 ALDH1A3P47895 512 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 NUMBP49757 651 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 GEMIN4P57678 1058 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 EFEMP1Q12805 493 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 PTK6Q13882 451 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 LCLAT1Q6UWP7 414 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 PRUNE1Q86TP1 453 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.95□□□□□ -0.54e-7■■■■■ 67.9
TRAPPC9-202ENST00000438773 ZNF669Q96BR6 464 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 RMDN1Q96DB5 314 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 STAMBPL1Q96FJ0 436 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 POPDC2Q9HBU9 364 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 NUDT5Q9UKK9 219 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 PADI3Q9ULW8 664 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 PFDN1O60925 122 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 ERBB2P04626 1255 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 CYP1A1P04798 512 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 SLC2A3P11169 496 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 PRKCZQ05513 592 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 DUPD1Q68J44 220 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 IL31Q6EBC2 164 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 WDR75Q8IWA0 830 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 LRRC34Q8IZ02 419 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 RIBC1Q8N443 379 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 SLC4A11Q8NBS3 891 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 ZNF784Q8NCA9 323 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 SNRNP25Q9BV90 132 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 PPARGC1AQ9UBK2 798 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 STK25O00506 426 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 PMPCBO75439 489 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 JCHAINP01591 159 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 UNGP13051 313 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 ETS1P14921 441 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 NOS2P35228 1153 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 PSEN1P49768 467 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 ARHGAP18Q8N392 663 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 CD99L2Q8TCZ2 262 aa11.95□□□□□ -0.5
TRAPPC9-202ENST00000438773 KCNK1O00180 336 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 POLBP06746 335 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 SNRPAP09012 282 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 SLC39A12Q504Y0 691 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 TMEM63BQ5T3F8 832 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 KCNT2Q6UVM3 1135 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 POLNQ7Z5Q5 900 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 LMO3Q8TAP4 145 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 GIT1Q9Y2X7 761 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 WNK3Q9BYP7 1800 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 UBR3Q6ZT12 1888 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 IRF1P10914 325 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 TGM2P21980 687 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 PAX7P23759 505 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 RBL1P28749 1068 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 FDFT1P37268 417 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 BRCC3P46736 316 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 PAPOLAP51003 745 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 DRG2P55039 364 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 ELAVL2Q12926 359 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 GRAMD1BQ3KR37 738 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 DCAF12L1Q5VU92 463 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 KLC3Q6P597 504 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 CRELD2Q6UXH1 353 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 CPNE8Q86YQ8 564 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 EXT2Q93063 718 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 ALKBH8Q96BT7 664 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 HDAC11Q96DB2 347 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 APOL2Q9BQE5 337 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 PCDHB5Q9Y5E4 795 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 FOXO6A8MYZ6 492 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 GYG2O15488 501 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 LIASO43766 372 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 HSPA4LO95757 839 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 CPA2P48052 419 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 TPD52P55327 224 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 MROH9Q5TGP6 573 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 TAPT1Q6NXT6 567 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 BBS12Q6ZW61 710 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 GBP7Q8N8V2 638 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 ATP6V0D2Q8N8Y2 350 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 WNT8BQ93098 351 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 CELF6Q96J87 481 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 LRRC37BQ96QE4 947 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 TMEM39AQ9NV64 488 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 PCDHGC3Q9UN70 934 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 RPS6KL1Q9Y6S9 549 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 MYH7BA7E2Y1 1941 aa11.94□□□□□ -0.5
TRAPPC9-202ENST00000438773 hCG_1818297A0A087WSY0 165 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms