RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C2orf42Q9NWW7 574 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 A0A0A0MRY4 1105 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 K7EQS6 105 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 TULP3O75386 442 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 KLKB1P03952 638 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 TYRP14679 529 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 UCHL3P15374 230 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 KRT9P35527 623 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 TNFRSF4P43489 277 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 MRPS21P82921 87 aaKnown RBP25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 KDSRQ06136 332 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 PDCLQ13371 301 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 DRAP1Q14919 205 aaPredicted RBP25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 TRIP4Q15650 581 aaPredicted RBP25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 DPY19L2P1Q6NXN4 242 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 TMEM110Q86TL2 294 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 LONP2Q86WA8 852 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 SCUBE3Q8IX30 993 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 CAMKK1Q8N5S9 505 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 CLEC4CQ8WTT0 213 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 SFMBT1Q9UHJ3 866 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 AGO1Q9UL18 857 aaKnown RBP25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 CEP83Q9Y592 693 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 FHOD1Q9Y613 1164 aa25.84■■□□□ 1.73
RAPGEF1-206ENST00000438647 CACNG3O60359 315 aa25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 CDK11BP21127 795 aaKnown RBP25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 HSF5Q4G112 596 aaPredicted RBP25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 DENND1CQ8IV53 801 aa25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 USP33Q8TEY7 942 aa25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 FAM149B1Q96BN6 582 aa25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 LHX5Q9H2C1 402 aa25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 DNAJC17Q9NVM6 304 aaKnown RBP25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 DAAM1Q9Y4D1 1078 aa25.83■■□□□ 1.73
RAPGEF1-206ENST00000438647 ATG2BQ96BY7 2078 aa25.83■■□□□ 1.72
RAPGEF1-206ENST00000438647 CCDC163A0A0D9SF12 145 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 TBC1D3BA6NDS4 549 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 E5RJQ4 531 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 NCAM1P13591 858 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 CNR2P34972 360 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 CLCN1P35523 988 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 COPB1P53618 953 aaKnown RBP25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 SEC13P55735 322 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 SNX16P57768 344 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 C2orf27AQ580R0 203 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 GRAMD4Q6IC98 578 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 BEND5Q7L4P6 421 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 SLC47A2Q86VL8 602 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 PHTF2Q8N3S3 785 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 CPXM2Q8N436 756 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 TERB1Q8NA31 727 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 NAA15Q9BXJ9 866 aaKnown RBP25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 STK33Q9BYT3 514 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 EPC1Q9H2F5 836 aa25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 LIMA1Q9UHB6 759 aaKnown RBP25.82■■□□□ 1.72
RAPGEF1-206ENST00000438647 LATS1O95835 1130 aa25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 CYBBP04839 570 aa25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 PNMA6AP0CW24 399 aaPredicted RBP25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 PTMSP20962 102 aa25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 FNTBP49356 437 aa25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 ZNF445P59923 1031 aa25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 DMC1Q14565 340 aa25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 HEATR6Q6AI08 1181 aaKnown RBP25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 KCNV2Q8TDN2 545 aa25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 CYTH4Q9UIA0 394 aa25.81■■□□□ 1.72
RAPGEF1-206ENST00000438647 CAPN9O14815 690 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 PAPSS1O43252 624 aaPredicted RBP25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 ZNF18P17022 549 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 MESP2Q0VG99 397 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 ANO6Q4KMQ2 910 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 NUGGCQ68CJ6 796 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 WDR5BQ86VZ2 330 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 PASD1Q8IV76 773 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 UNC45BQ8IWX7 931 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 FAM217AQ8IXS0 508 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 AOPEPQ8N6M6 819 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 PPP1R13BQ96KQ4 1090 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 BPIFA3Q9BQP9 254 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 PDCL3Q9H2J4 239 aa25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 RIF1Q5UIP0 2472 aaKnown RBP25.8■■□□□ 1.72
RAPGEF1-206ENST00000438647 LRRC10BA6NIK2 292 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 MSI1O43347 362 aaKnown RBP25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 PENKP01210 267 aaPredicted RBP25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 DMWDQ09019 674 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 NNTQ13423 1086 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 NCAPHQ15003 741 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 KLHL40Q2TBA0 621 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 TRMT11Q7Z4G4 463 aaKnown RBP25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 SUMF1Q8NBK3 374 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 BHMTQ93088 406 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 SERPINB11Q96P15 392 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 POPDC2Q9HBU9 364 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 RAB23Q9ULC3 237 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 MMP17Q9ULZ9 603 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 KIAA1549LQ6ZVL6 1849 aa25.79■■□□□ 1.72
RAPGEF1-206ENST00000438647 SMTNL1A8MU46 457 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 LGALS16A8MUM7 142 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 F8VZ95 297 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 APBB3O95704 486 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 CYP11B1P15538 503 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 TIE1P35590 1138 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms