RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 RING1Q06587 406 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 EFEMP1Q12805 493 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 STXBP5Q5T5C0 1151 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 BNIPLQ7Z465 357 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 PHLDB2Q86SQ0 1253 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 EMC1Q8N766 993 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 NIPA2Q8N8Q9 360 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 ARL14EPQ8N8R7 260 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-208ENST00000438518 ZSCAN18Q8TBC5 510 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-208ENST00000438518 SLC35G2Q8TBE7 412 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 ING5Q8WYH8 240 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 SMARCD2Q92925 531 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 PLD4Q96BZ4 506 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 ASB16Q96NS5 453 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 TDP1Q9NUW8 608 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 EPS15L1Q9UBC2 864 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 TLR6Q9Y2C9 796 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 XIRP2A4UGR9 3374 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 M0QYT0 321 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 IRAK2O43187 625 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 RNF8O76064 485 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 SLC2A3P11169 496 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 LAMP2P13473 410 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 RDXP35241 583 aaKnown RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 EIF4EBP2Q13542 120 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 TRIP4Q15650 581 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 MTSS1LQ765P7 747 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 SND1Q7KZF4 910 aaKnown RBP eCLIP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 TAC4Q86UU9 113 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 RNF10Q8N5U6 811 aaKnown RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 CELF5Q8N6W0 485 aaKnown RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 TDRD5Q8NAT2 981 aaKnown RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 UBE2Q2Q8WVN8 375 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 ATXN2LQ8WWM7 1075 aaKnown RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 CENPIQ92674 756 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 TRIM44Q96DX7 344 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-208ENST00000438518 CFAP57Q96MR6 1250 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 RNF38Q9H0F5 515 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 FAM204AQ9H8W3 233 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 PRKAG3Q9UGI9 489 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 PPP2R2CQ9Y2T4 447 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 DOCK8Q8NF50 2099 aa19.18■□□□□ 0.66
HDAC6-208ENST00000438518 PSMA2P25787 234 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 MAN1A1P33908 653 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 PPP2R5DQ14738 602 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 CCDC14Q49A88 953 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 ACBD5Q5T8D3 534 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-208ENST00000438518 NUGGCQ68CJ6 796 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 TRNP1Q6NT89 227 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 ARID3BQ8IVW6 561 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-208ENST00000438518 UNC45BQ8IWX7 931 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 NXPE3Q969Y0 559 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 ZNF830Q96NB3 372 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-208ENST00000438518 SLC22A12Q96S37 553 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 MYADMQ96S97 322 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 KLF16Q9BXK1 252 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-208ENST00000438518 DCLK3Q9C098 648 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.17■□□□□ 0.66
HDAC6-208ENST00000438518 DDIT4Q9NX09 232 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 LSM7Q9UK45 103 aaKnown RBP19.17■□□□□ 0.66
HDAC6-208ENST00000438518 CPQQ9Y646 472 aa19.17■□□□□ 0.66
HDAC6-208ENST00000438518 BRWD1Q9NSI6 2320 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 GOLGA6L9A6NEM1 432 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 NRG2O14511 850 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-208ENST00000438518 GJB6O95452 261 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 LATS1O95835 1130 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 TBX18O95935 607 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 IGLV3-27P01718 113 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 CCR1P32246 355 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 NOP2P46087 812 aaKnown RBP19.16■□□□□ 0.66
HDAC6-208ENST00000438518 AIF1P55008 147 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 DEUP1Q05D60 604 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 BRMS1LQ5PSV4 323 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 MIB1Q86YT6 1006 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 ZDHHC14Q8IZN3 488 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 FAM172AQ8WUF8 416 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 AZIN2Q96A70 460 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 ELSPBP1Q96BH3 223 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 SLC39A13Q96H72 371 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 ZFRQ96KR1 1074 aaKnown RBP19.16■□□□□ 0.66
HDAC6-208ENST00000438518 ZSWIM3Q96MP5 696 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 CYP2S1Q96SQ9 504 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 TBCBQ99426 244 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 ZFP14Q9HCL3 533 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 OSGEPQ9NPF4 335 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 SFMBT1Q9UHJ3 866 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 NUDT5Q9UKK9 219 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 ZNF510Q9Y2H8 683 aa19.16■□□□□ 0.66
HDAC6-208ENST00000438518 SLC12A8A0AV02 714 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 RCCD1A6NED2 376 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 APOEP02649 317 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 PCK1P35558 622 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 SLC1A1P43005 524 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 HARS2P49590 506 aaKnown RBP19.15■□□□□ 0.66
HDAC6-208ENST00000438518 TBX4P57082 545 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 OGDHQ02218 1023 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 USP4Q13107 963 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 ARHGAP29Q52LW3 1261 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 FAM78AQ5JUQ0 283 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 USP13Q92995 863 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms