RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PTGR1Q14914 329 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 CLCA4Q14CN2 919 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 INPP5JQ15735 1006 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZNF324BQ6AW86 544 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 CAPRIN2Q6IMN6 1127 aaKnown RBP3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 NPNTQ6UXI9 565 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 RBM44Q6ZP01 1051 aaKnown RBP3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 MAEAQ7L5Y9 396 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 TRAPPC11Q7Z392 1133 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 TFAP2DQ7Z6R9 452 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 ATP2A3Q93084 1043 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 TAAR9Q96RI9 348 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 RHOBTB2Q9BYZ6 727 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 ARHGAP39Q9C0H5 1083 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 RBM38Q9H0Z9 239 aaKnown RBP3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 CPNE7Q9UBL6 633 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 DNAJB11Q9UBS4 358 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 AFF4Q9UHB7 1163 aaKnown RBP3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 ANAPC4Q9UJX5 808 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 SLC27A6Q9Y2P4 619 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 CAPN8A6NHC0 703 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 TMIGD3P0DMS9 266 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 MYBP10242 640 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 ST6GAL1P15907 406 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 TFEBP19484 476 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 TNFRSF8P28908 595 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 P2RX3P56373 397 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 PIN1Q13526 163 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 CNGA3Q16281 694 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 MZT2AQ6P582 158 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 UEVLDQ8IX04 471 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 YAF2Q8IY57 180 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 ADGRF4Q8IZF3 695 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 FSTL5Q8N475 847 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 SLC35G2Q8TBE7 412 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 NMD3Q96D46 503 aaKnown RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 FAM84BQ96KN1 310 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 MYLK2Q9H1R3 596 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 MOV10Q9HCE1 1003 aaKnown RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 AGO4Q9HCK5 861 aaKnown RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 VPS45Q9NRW7 570 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 SEMA5BQ9P283 1151 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 MID2Q9UJV3 735 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 NOP58Q9Y2X3 529 aaKnown RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 HEMK1Q9Y5R4 338 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 USP19O94966 1318 aa3.84□□□□□ -1.79
HMGB1P31-201ENST00000437242 TCF20Q9UGU0 1960 aaKnown RBP3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 TRBV5-3A0A0A0MS03 114 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 A0A1W2PPC1 479 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 ERVV-2B6SEH9 535 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 SPTLC2O15270 562 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 UGDHO60701 494 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 TUSC2O75896 110 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 INMTO95050 263 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 HOXB2P14652 356 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 ZKSCAN1P17029 563 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 ARRB2P32121 409 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 KCNJ4P48050 445 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 POLD2P49005 469 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 VPS41P49754 854 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 RAE1P78406 368 aaKnown RBP3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 OVCH2Q7RTZ1 564 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 SKAP1Q86WV1 359 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 ANKRD13AQ8IZ07 590 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 MIB2Q96AX9 1013 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 NTPCRQ9BSD7 190 aaKnown RBP3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 C22orf23Q9BZE7 217 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 VPS51Q9UID3 782 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 ZNF180Q9UJW8 692 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 UNC13AQ9UPW8 1703 aa3.83□□□□□ -1.8
HMGB1P31-201ENST00000437242 ZNF335Q9H4Z2 1342 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 hCG_2014768A0A024R1R8 64 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 E2F8A0AVK6 867 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 CFAP69A5D8W1 941 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 C16orf96A6NNT2 1141 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 ISM1B1AKI9 464 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 FAM227AF5H4B4 570 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 ACOT8O14734 319 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 MBPP02686 304 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 SLC3A2P08195 630 aaKnown RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 HMGB1P09429 215 aaKnown RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 TXNP10599 105 aaKnown RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 FGF3P11487 239 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 YY1P25490 414 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 COPAP53621 1224 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 RPS16P62249 146 aaKnown RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 KCNAB1Q14722 419 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 ODF3L2Q3SX64 289 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 C3orf38Q5JPI3 329 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 SWSAP1Q6NVH7 229 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 RFX6Q8HWS3 928 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 IQCF1Q8N6M8 205 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 MED30Q96HR3 178 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 GPATCH3Q96I76 525 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 LMLNQ96KR4 655 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 SF3B5Q9BWJ5 86 aaKnown RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 SAP30LQ9HAJ7 183 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 FZD3Q9NPG1 666 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms