RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 TRIM59Q8IWR1 403 aa18.38■□□□□ 0.53
SBDSP1-203ENST00000437201 SCML4Q8N228 414 aa18.38■□□□□ 0.53
SBDSP1-203ENST00000437201 PGBD3Q8N328 593 aa18.38■□□□□ 0.53
SBDSP1-203ENST00000437201 EHBP1Q8NDI1 1231 aa18.38■□□□□ 0.53
SBDSP1-203ENST00000437201 SRRTQ9BXP5 876 aaKnown RBP18.38■□□□□ 0.53
SBDSP1-203ENST00000437201 KIAA1549LQ6ZVL6 1849 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 CACNA1AO00555 2505 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 TCRBV21S2A2A0A5A6 115 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 SLC12A8A0AV02 714 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 MAP3K13O43283 966 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 AFPP02771 609 aaKnown RBP18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 KLKB1P03952 638 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 HMBSP08397 361 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 CHRM1P11229 460 aaPredicted RBP18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 HARS2P49590 506 aaKnown RBP18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 LIMK1P53667 647 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 STX17P56962 302 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 CREB5Q02930 508 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 ADIGQ0VDE8 80 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 IL31Q6EBC2 164 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 CHPFQ8IZ52 775 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 OLIG1Q8TAK6 271 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 UBA3Q8TBC4 463 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 HMGB4Q8WW32 186 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 ABCC13Q9NSE7 274 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 KIAA1468Q9P260 1216 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 AGO1Q9UL18 857 aaKnown RBP18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 INVSQ9Y283 1065 aa18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 HBS1LQ9Y450 684 aaKnown RBP18.37■□□□□ 0.53
SBDSP1-203ENST00000437201 BCLAF3A2AJT9 711 aaKnown RBP18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 ANTXRLA6NF34 631 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 TULP2O00295 520 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 NPC1O15118 1278 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 CAVIN2O95810 425 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 PENKP01210 267 aaPredicted RBP18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 HOXB2P14652 356 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 P2RY2P41231 377 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 ZNF445P59923 1031 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 SF3A2Q15428 464 aaKnown RBP18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 PKDCCQ504Y2 493 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 SPDYCQ5MJ68 293 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 BSPRYQ5W0U4 402 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 LPCAT2Q7L5N7 544 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 DENND1CQ8IV53 801 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 CPXM2Q8N436 756 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 LMO3Q8TAP4 145 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 IRGQQ8WZA9 623 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 GOLGA1Q92805 767 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 FAM81BQ96LP2 452 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 CHMP5Q9NZZ3 219 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 RWDD2AQ9UIY3 292 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 FBXO10Q9UK96 956 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 SLC27A6Q9Y2P4 619 aa18.36■□□□□ 0.53
SBDSP1-203ENST00000437201 MYOFQ9NZM1 2061 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 DCDC2BA2VCK2 349 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 GFRA2O00451 464 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 TRIM24O15164 1050 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 CISD3P0C7P0 127 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 LCP1P13796 627 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 HNRNPLP14866 589 aaKnown RBP eCLIP18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 DPP6P42658 865 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 CCDC6Q16204 474 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 RRAGAQ7L523 313 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 CYP2U1Q7Z449 544 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 FMNL3Q8IVF7 1028 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 RBBP8NLQ8NC74 664 aaPredicted RBP18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 SLC35F5Q8WV83 523 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 UCMAQ8WVF2 138 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 TFAP2BQ92481 460 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 BHMTQ93088 406 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 HSFY1Q96LI6 401 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 SLC2A11Q9BYW1 496 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 PLK2Q9NYY3 685 aa18.35■□□□□ 0.53
SBDSP1-203ENST00000437201 SPAG17Q6Q759 2223 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 RALGAPA1Q6GYQ0 2036 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 MED19A0JLT2 244 aaPredicted RBP18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 PRRT4C9JH25 899 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 M0QYV0 167 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 GDF9O60383 454 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 ZNF217O75362 1048 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 FBXO21O94952 628 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 LATS1O95835 1130 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 ZNF132P52740 706 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 TRIP4Q15650 581 aaPredicted RBP18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 FYB2Q5VWT5 728 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 EGFLAMQ63HQ2 1017 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 SLC36A4Q6YBV0 504 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 ENOSF1Q7L5Y1 443 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 BHLHA9Q7RTU4 235 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 DDI1Q8WTU0 396 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 ZDHHC4Q9NPG8 344 aa18.34■□□□□ 0.53
SBDSP1-203ENST00000437201 YJEFN3A6XGL0 299 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 E7ENQ6 273 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 RNF225M0QZC1 329 aaPredicted RBP18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 MED7O43513 233 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 DHPSP49366 369 aaPredicted RBP18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 DAOAP59103 153 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 CAMK4Q16566 473 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 MPPE1Q53F39 396 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms