RNA–Protein interactions for RNA: ENST00000437002.5

MMS19-208, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

APPRIS ALT2 TSL 5

Gene MMS19, Length 933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-208	ENST00000437002	PCNX2	A6NKB5	2137 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	SRRM3	A6NNA2	597 aa	Predicted RBP	18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	ARHGAP33	O14559	1287 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	ZNF217	O75362	1048 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	GJB3	O75712	270 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	PENK	P01210	267 aa	Predicted RBP	18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	HOXB3	P14651	431 aa	Predicted RBP	18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	MAOB	P27338	520 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	PLA2G4A	P47712	749 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	GEN1	Q17RS7	908 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	FYB2	Q5VWT5	728 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	CCDC186	Q7Z3E2	898 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	NT5C1A	Q9BXI3	368 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	NAGPA	Q9UK23	515 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	LSM7	Q9UK45	103 aa	Known RBP	18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	CLEC4E	Q9ULY5	219 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	NEUROG3	Q9Y4Z2	214 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	STON1	Q9Y6Q2	735 aa		18.82	■□□□□ 0.6
MMS19-208	ENST00000437002	MFAP3	P55082	362 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	FUT11	Q495W5	492 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	ATL3	Q6DD88	541 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	RBBP8NL	Q8NC74	664 aa	Predicted RBP	18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	SEMA4D	Q92854	862 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	NIF3L1	Q9GZT8	377 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	MKRN2	Q9H000	416 aa	Known RBP	18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	CYP3A43	Q9HB55	503 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	DNAAF2	Q9NVR5	837 aa	Known RBP	18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	MAPK8IP1	Q9UQF2	711 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	FRMD4B	Q9Y2L6	1034 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002	MYH10	P35580	1976 aa		18.81	■□□□□ 0.6
MMS19-208	ENST00000437002		A0A1W2PQD8	194 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	KCNJ18	B7U540	433 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	GFRA2	O00451	464 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	MAPK13	O15264	365 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	OPHN1	O60890	802 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	CMA1	P23946	247 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	IL12RB1	P42701	662 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	ATXN3	P54252	364 aa	Predicted RBP	18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	GOLGA8F	Q08AF8	430 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	GOLGA8DP	Q0D2H9	430 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	ENPP2	Q13822	863 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	ZNF394	Q53GI3	561 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	SDE2	Q6IQ49	451 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	KIAA1324	Q6UXG2	1013 aa	Known RBP	18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	HDDC3	Q8N4P3	179 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	CHCHD4	Q8N4Q1	142 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	ZNF276	Q8N554	614 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	ZCCHC14	Q8WYQ9	949 aa	Known RBP	18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	DUSP16	Q9BY84	665 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	MMRN2	Q9H8L6	949 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	SLC27A6	Q9Y2P4	619 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	MSRB2	Q9Y3D2	182 aa		18.8	■□□□□ 0.6
MMS19-208	ENST00000437002	TMEM8B	A6NDV4	472 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	CALU	O43852	315 aa	Predicted RBP	18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	SH3BP5	O60239	455 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	KIF20A	O95235	890 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	CAPNS1	P04632	268 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	HMBS	P08397	361 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	NR2F2	P24468	414 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	NFIL3	Q16649	462 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	BHLHA9	Q7RTU4	235 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	SPRYD3	Q8NCJ5	442 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	PIWIL1	Q96J94	861 aa	Known RBP	18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	ARID3A	Q99856	593 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	CLIC5	Q9NZA1	410 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	USP36	Q9P275	1121 aa	Known RBP	18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	THAP10	Q9P2Z0	257 aa	Predicted RBP	18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	RASAL2	Q9UJF2	1139 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	CFAP45	Q9UL16	551 aa		18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	AGO1	Q9UL18	857 aa	Known RBP	18.79	■□□□□ 0.6
MMS19-208	ENST00000437002	TAF4	O00268	1085 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	RHOBTB3	O94955	611 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	CD6	P30203	668 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	CORO1A	P31146	461 aa	Known RBP	18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	NDUFA8	P51970	172 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	MCCD1	P59942	119 aa	Predicted RBP	18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	EFEMP1	Q12805	493 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	DPYD	Q12882	1025 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	PLEKHG6	Q3KR16	790 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	ZCWPW2	Q504Y3	356 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	TMEM215	Q68D42	235 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	RAB44	Q7Z6P3	723 aa	Predicted RBP	18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	FAM186B	Q8IYM0	893 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	SLC4A11	Q8NBS3	891 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	SORCS1	Q8WY21	1168 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	NDRG1	Q92597	394 aa	Known RBP	18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	EEF2KMT	Q96G04	330 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	TOE1	Q96GM8	510 aa	Known RBP	18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	WSB2	Q9NYS7	404 aa	Predicted RBP	18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	ZDHHC9	Q9Y397	364 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	LOC400499	M0QZD8	3231 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	CELSR3	Q9NYQ7	3312 aa		18.78	■□□□□ 0.6
MMS19-208	ENST00000437002	CACNA1G	O43497	2377 aa		18.77	■□□□□ 0.6
MMS19-208	ENST00000437002	FAM221B	A6H8Z2	402 aa		18.77	■□□□□ 0.6
MMS19-208	ENST00000437002	TULP2	O00295	520 aa		18.77	■□□□□ 0.6
MMS19-208	ENST00000437002	PRKCH	P24723	683 aa		18.77	■□□□□ 0.6
MMS19-208	ENST00000437002	PSEN1	P49768	467 aa		18.77	■□□□□ 0.6
MMS19-208	ENST00000437002	COPA	P53621	1224 aa		18.77	■□□□□ 0.6
MMS19-208	ENST00000437002	RAD23B	P54727	409 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms