RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CHURC1Q8WUH1 139 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 DDX43Q9NXZ2 648 aaKnown RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 A8MXQ7 604 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 MAGEC1O60732 1142 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 ERBB2P04626 1255 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 FGFR3P22607 806 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 TCF7P36402 384 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 PRAMEP78395 509 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 PRKCEQ02156 737 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 SLC18A2Q05940 514 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 BAATQ14032 418 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 NADK2Q4G0N4 442 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 PABPC1LQ4VXU2 614 aaKnown RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 SLC26A11Q86WA9 606 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 ZSCAN18Q8TBC5 510 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 TWNKQ96RR1 684 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 IDI2Q9BXS1 227 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 IMPG2Q9BZV3 1241 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 C17orf75Q9HAS0 396 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 POMPQ9Y244 141 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 MRPL42Q9Y6G3 142 aaKnown RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 MCF2LO15068 1137 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 EXTL3O43909 919 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 SIN3BO75182 1162 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 RXRBP28702 533 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 CA9Q16790 459 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 UNC5AQ6ZN44 842 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 CMC1Q7Z7K0 106 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 CAND1Q86VP6 1230 aaKnown RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 C4orf19Q8IY42 314 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 RNF168Q8IYW5 571 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 TRIML2Q8N7C3 387 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 PAF1Q8N7H5 531 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 TFB1MQ8WVM0 346 aaKnown RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 TMIGD2Q96BF3 282 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 CLMNQ96JQ2 1002 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 WWP1Q9H0M0 922 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 EHMT1Q9H9B1 1298 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 COPS7BQ9H9Q2 264 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 KCNK4Q9NYG8 393 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 SOX13Q9UN79 622 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 HES2Q9Y543 173 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 UBIAD1Q9Y5Z9 338 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 CNTRLQ7Z7A1 2325 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 TCRBV5S1A1TA0A578 114 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 ZBBXA8MT70 800 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 TMX2-CTNND1H3BSU7 103 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 VILLO15195 856 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 METTL18O95568 372 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 HMGCRP04035 888 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 UQCRBP14927 111 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 N4BP2L1Q5TBK1 243 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 TRNP1Q6NT89 227 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 TMC7Q7Z402 723 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 C10orf107Q8IVU9 208 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 TMEM192Q8IY95 271 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 STKLD1Q8NE28 680 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 CXorf38Q8TB03 319 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 HSPBAP1Q96EW2 488 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 ZNF512Q96ME7 567 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 NR1H4Q96RI1 486 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 SEMA6AQ9H2E6 1030 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 WDR55Q9H6Y2 383 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 SEPT10Q9P0V9 454 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 CDH22Q9UJ99 828 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 COL11A1P12107 1806 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 H3BSA7 217 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 K7ERI5 159 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 ZBTB14O43829 449 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 C1QAP02745 245 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 ITGA2BP08514 1039 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 SNRPAP09012 282 aaKnown RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 SRGAP2CP0DJJ0 459 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 TFE3P19532 575 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 MAGEA10P43363 369 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 ROR1Q01973 937 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 NRF1Q16656 503 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 GEN1Q17RS7 908 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 TTC39BQ5VTQ0 682 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 KLHDC10Q6PID8 442 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 CHSY1Q86X52 802 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 LPIN3Q9BQK8 851 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 FOXP3Q9BZS1 431 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 BRCA2P51587 3418 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 SDR42E2A6NKP2 422 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 HNRNPCL1O60812 293 aaKnown RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 TFAP2AP05549 437 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 SMIM18P0DKX4 95 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 SESN2P58004 480 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 EN1Q05925 392 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 TBL3Q12788 808 aaKnown RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 DYNC1I2Q13409 638 aaKnown RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 MYLK3Q32MK0 819 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 EEPD1Q7L9B9 569 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 AMIGO2Q86SJ2 522 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 ZFP28Q8NHY6 868 aa10.81□□□□□ -0.68
SCAF4-203ENST00000434667 MMADHCQ9H3L0 296 aaPredicted RBP10.81□□□□□ -0.68
SCAF4-203ENST00000434667 E7ESA3 106 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms