RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 RRN3Q9NYV6 651 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 CCNL1Q9UK58 526 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 ITGA11Q9UKX5 1188 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 ENO3P13929 434 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 CDH2P19022 906 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 NR1H2P55055 460 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 SNRPFP62306 86 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 TUBB3Q13509 450 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 ZBTB41Q5SVQ8 909 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 TEDDM1Q5T9Z0 273 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 ZBTB46Q86UZ6 589 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 LDHDQ86WU2 507 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 KIAA0319LQ8IZA0 1049 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 OR5B17Q8NGF7 314 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 IMPG2Q9BZV3 1241 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 RBM38Q9H0Z9 239 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 DBNDD1Q9H9R9 158 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 RBAKQ9NYW8 714 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 THEGQ9P2T0 379 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 RSL24D1Q9UHA3 163 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 SORCS3Q9UPU3 1222 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 C3orf70A6NLC5 250 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 C4BPAP04003 597 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 KRT7P08729 469 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 PDGFRBP09619 1106 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ENTPD1P49961 510 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ORC1Q13415 861 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 PDE1CQ14123 709 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 CDO1Q16878 200 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 B3GNT9Q6UX72 402 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 C10orf107Q8IVU9 208 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ZSCAN18Q8TBC5 510 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 GIPC3Q8TF64 312 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 LENG8Q96PV6 779 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 YIPF2Q9BWQ6 316 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 CDK5RAP2Q96SN8 1893 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ZNFX1Q9P2E3 1918 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 AP1G1O43747 822 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 PIM1P11309 404 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 CDH6P55285 790 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 GRAMD4Q6IC98 578 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 MAVSQ7Z434 540 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 TSPAN14Q8NG11 270 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ADAM32Q8TC27 787 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 DDI1Q8WTU0 396 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ATXN7L3BQ96GX2 97 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ZNF512Q96ME7 567 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 FAM198AQ9UFP1 575 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ZNF180Q9UJW8 692 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 AGO2Q9UKV8 859 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 DHX15O43143 795 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 SPAG6O75602 509 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 APOEP02649 317 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 FGFR3P22607 806 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 PSMC1P62191 440 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 SULT2A1Q06520 285 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 UNC5AQ6ZN44 842 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 NUP93Q8N1F7 819 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 MPP5Q8N3R9 675 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ARFGAP1Q8N6T3 406 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 FAM156AQ8NDB6 213 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 BHLHE22Q8NFJ8 381 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 FNDC8Q8TC99 324 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 DIS3LQ8TF46 1054 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 EME1Q96AY2 570 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 FBXL18Q96ME1 805 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 ST6GALNAC4Q9H4F1 302 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 C6orf203Q9P0P8 240 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 CEPT1Q9Y6K0 416 aa11.92□□□□□ -0.5
HMGCS1-202ENST00000433297 CASQ2O14958 399 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 ADCY6O43306 1168 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 CSPG5O95196 566 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 CST3P01034 146 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 PSMC3P17980 439 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 CRHR1P34998 444 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 MTTPP55157 894 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 CRADDP78560 199 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 PRKG1Q13976 671 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 PPM1LQ5SGD2 360 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 SCYL2Q6P3W7 929 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 PATL1Q86TB9 770 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 MOCOSQ96EN8 888 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 WRNIP1Q96S55 665 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 PKP2Q99959 881 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 C17orf75Q9HAS0 396 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 COL20A1Q9P218 1284 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 RAB26Q9ULW5 256 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 ZNF541Q9H0D2 1346 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 APOC4-APOC2K7ER74 178 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 NFIBO00712 420 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 ZBTB14O43829 449 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 APOC2P02655 101 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 XRCC1P18887 633 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 PSMD6Q15008 389 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 TKFCQ3LXA3 575 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 ANKDD1AQ495B1 522 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 PPM1JQ5JR12 505 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms