RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 NT5C3BQ969T7 300 aa15.02■□□□□ -0
CSTF3-202ENST00000431742 FAM83CQ9BQN1 747 aa15.02■□□□□ -0
CSTF3-202ENST00000431742 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02■□□□□ -0
CSTF3-202ENST00000431742 COL25A1Q9BXS0 654 aaPredicted RBP15.02■□□□□ -0
CSTF3-202ENST00000431742 NHEJ1Q9H9Q4 299 aaPredicted RBP15.02■□□□□ -0
CSTF3-202ENST00000431742 METTL5Q9NRN9 209 aaKnown RBP15.02■□□□□ -0
CSTF3-202ENST00000431742 SFMBT1Q9UHJ3 866 aa15.02■□□□□ -0
CSTF3-202ENST00000431742 TECTAO75443 2155 aa15.02□□□□□ -0.01
CSTF3-202ENST00000431742 SLC12A8A0AV02 714 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 CAPN9O14815 690 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 IRAK2O43187 625 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 MSI1O43347 362 aaKnown RBP15.01□□□□□ -0.01
CSTF3-202ENST00000431742 IRF1P10914 325 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 GDI1P31150 447 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 NOS2P35228 1153 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 GPC5P78333 572 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 GFPT1Q06210 699 aaPredicted RBP15.01□□□□□ -0.01
CSTF3-202ENST00000431742 RING1Q06587 406 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 TRIP4Q15650 581 aaPredicted RBP15.01□□□□□ -0.01
CSTF3-202ENST00000431742 DCAF6Q58WW2 860 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 PLEKHA7Q6IQ23 1121 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 ALKBH5Q6P6C2 394 aaKnown RBP15.01□□□□□ -0.01
CSTF3-202ENST00000431742 Q6ZNB5 142 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 HTR3DQ70Z44 454 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 BNIPLQ7Z465 357 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 YAF2Q8IY57 180 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 UBALD2Q8IYN6 164 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 SPC24Q8NBT2 197 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 OSCP1Q8WVF1 389 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 DNASE1L2Q92874 299 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 PLD4Q96BZ4 506 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 TRIM11Q96F44 468 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 SERPINB11Q96P15 392 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 NPY6RQ99463 290 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
CSTF3-202ENST00000431742 ADAM33Q9BZ11 813 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 TRPV5Q9NQA5 729 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 THG1LQ9NWX6 298 aaKnown RBP15.01□□□□□ -0.01
CSTF3-202ENST00000431742 RRN3Q9NYV6 651 aa15.01□□□□□ -0.01
CSTF3-202ENST00000431742 C2CD4BA6NLJ0 364 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 SIGLEC16A6NMB1 481 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 ZNF263O14978 683 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 GJB6O95452 261 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 TRUB2O95900 331 aaKnown RBP15□□□□□ -0.01
CSTF3-202ENST00000431742 KLKB1P03952 638 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 MYBL1P10243 752 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 KPNA1P52294 538 aaPredicted RBP15□□□□□ -0.01
CSTF3-202ENST00000431742 PDGFRLQ15198 375 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 EML3Q32P44 896 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 DNAJC24Q6P3W2 148 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 PHLDB2Q86SQ0 1253 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 JOSD2Q8TAC2 188 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 ADAM32Q8TC27 787 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 IRF7Q92985 503 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 SLC39A13Q96H72 371 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 ZFYVE19Q96K21 471 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 FCRL2Q96LA5 508 aaPredicted RBP15□□□□□ -0.01
CSTF3-202ENST00000431742 BRD9Q9H8M2 597 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 HPS4Q9NQG7 708 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15□□□□□ -0.01
CSTF3-202ENST00000431742 TLR6Q9Y2C9 796 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 SH3BP1Q9Y3L3 701 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 WNT6Q9Y6F9 365 aa15□□□□□ -0.01
CSTF3-202ENST00000431742 DOCK4Q8N1I0 1966 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 SLC9A3R1O14745 358 aaPredicted RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 ATMINO43313 823 aaPredicted RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 DCXO43602 365 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 AKR1B10O60218 316 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 KRT3P12035 628 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 CORO1AP31146 461 aaKnown RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 RFC1P35251 1148 aaPredicted RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 MRE11P49959 708 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 TBX4P57082 545 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 RNASE9P60153 205 aaKnown RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 ZXDAP98168 799 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 MAMLD1Q13495 774 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 SLC25A52Q3SY17 297 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 CCDC122Q5T0U0 273 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 CC2D1AQ6P1N0 951 aaPredicted RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 TMEM139Q8IV31 216 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 BBS7Q8IWZ6 715 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 EMC1Q8N766 993 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 ZNF653Q96CK0 615 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 OTUB2Q96DC9 234 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 PGAP3Q96FM1 320 aaPredicted RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 CCDC42Q96M95 316 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 SELENOOQ9BVL4 669 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 DCLK3Q9C098 648 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 DEF6Q9H4E7 631 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 FAM204AQ9H8W3 233 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 SPTLC3Q9NUV7 552 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 DUS2Q9NX74 493 aaKnown RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 CALCOCO1Q9P1Z2 691 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 TBC1D14Q9P2M4 693 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 CNOT8Q9UFF9 292 aaKnown RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 LSM7Q9UK45 103 aaKnown RBP14.99□□□□□ -0.01
CSTF3-202ENST00000431742 STAP1Q9ULZ2 295 aa14.99□□□□□ -0.01
CSTF3-202ENST00000431742 F5P12259 2224 aa14.98□□□□□ -0.01
CSTF3-202ENST00000431742 ANKRD62A6NC57 917 aa14.98□□□□□ -0.01
CSTF3-202ENST00000431742 SCAMP3O14828 347 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms