RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 ETFBP38117 255 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 TAF10Q12962 218 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 DSC3Q14574 896 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 ZNF280DQ6N043 979 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 VPS52Q8N1B4 723 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 TMEM174Q8WUU8 243 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 TRIM43Q96BQ3 446 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-205ENST00000431183 RTP3Q9BQQ7 232 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 TRIM56Q9BRZ2 755 aaKnown RBP11.72□□□□□ -0.53
SMPD4-205ENST00000431183 TSEN34Q9BSV6 310 aaKnown RBP11.72□□□□□ -0.53
SMPD4-205ENST00000431183 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 ATXN3LQ9H3M9 355 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 GDAP2Q9NXN4 497 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 PLK2Q9NYY3 685 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 CDH9Q9ULB4 789 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 CAPN7Q9Y6W3 813 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 ZNF623O75123 536 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 SKIP12755 728 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 MCM3P25205 808 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
SMPD4-205ENST00000431183 EPHB4P54760 987 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 TPI1P60174 286 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 EFHC2Q5JST6 749 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 EFHC1Q5JVL4 640 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 RNF135Q8IUD6 432 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 NPAS4Q8IUM7 802 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 CRYBG2Q8N1P7 616 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 ARL8AQ96BM9 186 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 CYP2S1Q96SQ9 504 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 SPON2Q9BUD6 331 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 CRISPLD1Q9H336 500 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 F5P12259 2224 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 EEF2KO00418 725 aaKnown RBP11.71□□□□□ -0.53
SMPD4-205ENST00000431183 AMHP03971 560 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 SETSIPP0DME0 302 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 LRPAP1P30533 357 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 HOXC8P31273 242 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 VCPP55072 806 aaKnown RBP11.71□□□□□ -0.53
SMPD4-205ENST00000431183 STILQ15468 1287 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 PLEKHG4Q58EX7 1191 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 FBXO46Q6PJ61 603 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-205ENST00000431183 CTAGE3PQ8IX95 158 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 ZBED8Q8IZ13 594 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 EXD1Q8NHP7 514 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 GIMAP7Q8NHV1 300 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 CD101Q93033 1021 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 ZIM3Q96PE6 472 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 HNRNPABQ99729 332 aaKnown RBP11.71□□□□□ -0.53
SMPD4-205ENST00000431183 SCN10AQ9Y5Y9 1956 aa11.71□□□□□ -0.53
SMPD4-205ENST00000431183 SLC12A8A0AV02 714 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 TTC24A2A3L6 582 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-205ENST00000431183 GOLGA6CA6NDK9 693 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 CAPN15O75808 1086 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 GOLGA6DP0CG33 693 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 LONRF1Q17RB8 773 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 PLPP4Q5VZY2 271 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 COLGALT2Q8IYK4 626 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 FAF2Q96CS3 445 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 MCRS1Q96EZ8 462 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 CFAP36Q96G28 342 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 FTHL17Q9BXU8 183 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 NMUR1Q9HB89 426 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 POPDC2Q9HBU9 364 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 LRRC4CQ9HCJ2 640 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 GKN1Q9NS71 199 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 GOLGA6AQ9NYA3 693 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 NUP205Q92621 2012 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 hCG_1818297A0A087WSY0 165 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 APOL1O14791 398 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 XPO1O14980 1071 aaKnown RBP11.71□□□□□ -0.54
SMPD4-205ENST00000431183 PSTPIP1O43586 416 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 WARSP23381 471 aaKnown RBP11.71□□□□□ -0.54
SMPD4-205ENST00000431183 CDKN2BP42772 138 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 SESN2P58004 480 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-205ENST00000431183 PSMD5Q16401 504 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 KCNT2Q6UVM3 1135 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 C4orf50Q6ZRC1 276 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 TTC39CQ8N584 583 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 ATL2Q8NHH9 583 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 TTPALQ9BTX7 342 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 IL1RAPL1Q9NZN1 696 aa11.71□□□□□ -0.54
SMPD4-205ENST00000431183 SF3B1O75533 1304 aaKnown RBP eCLIP11.7□□□□□ -0.542e-10■■■■■ 48.1
SMPD4-205ENST00000431183 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-205ENST00000431183 SYF2O95926 243 aaKnown RBP11.7□□□□□ -0.54
SMPD4-205ENST00000431183 SLC29A2Q14542 456 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 ERMARDQ5T6L9 678 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 RFWD3Q6PCD5 774 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 CES3Q6UWW8 571 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 DENND5BQ6ZUT9 1274 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
SMPD4-205ENST00000431183 HOOK3Q86VS8 718 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 CCDC13Q8IYE1 715 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 ATXN7L3BQ96GX2 97 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 KCNK9Q9NPC2 374 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 KANSL3Q9P2N6 904 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 PCDHB5Q9Y5E4 795 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 CPP00450 1065 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 SHBGP04278 402 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 SAT1P21673 171 aa11.7□□□□□ -0.54
SMPD4-205ENST00000431183 WEE1P30291 646 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms