RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 EPHA3P29320 983 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 PRKAR1BP31321 381 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 LIPAP38571 399 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 MTHFSP49914 203 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 CPT1AP50416 773 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 CLCN2P51788 898 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 BCAT1P54687 386 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 PDE1AP54750 535 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 FOXF2Q12947 444 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 KCTD2Q14681 263 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 FAM110CQ1W6H9 321 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBC1D25Q3MII6 688 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 TMTC4Q5T4D3 741 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 DEPDC1Q5TB30 811 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 RAP1GAP2Q684P5 730 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 TANGO2Q6ICL3 276 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 CEP85Q6P2H3 762 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 FBXO38Q6PIJ6 1188 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 PARS2Q7L3T8 475 aaKnown RBP3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 RSRC2Q7L4I2 434 aaKnown RBP3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 ARHGEF25Q86VW2 580 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 RAB11FIP4Q86YS3 637 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 RASAL3Q86YV0 1011 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 VGLL2Q8N8G2 317 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 NGDNQ8NEJ9 315 aaKnown RBP3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 GLG1Q92896 1179 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 USP13Q92995 863 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 TRIM63Q969Q1 353 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 PPP2R3CQ969Q6 453 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 RSPRY1Q96DX4 576 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 LTV1Q96GA3 475 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZSCAN31Q96LW9 406 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 FAM167BQ9BTA0 163 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 TRIM5Q9C035 493 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 CPNE5Q9HCH3 593 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 UBN1Q9NPG3 1134 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 BLOC1S4Q9NUP1 217 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 RGL1Q9NZL6 768 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 DNMT3BQ9UBC3 853 aaKnown RBP3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 LPAR3Q9UBY5 353 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZNF212Q9UDV6 495 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 GABRQQ9UN88 632 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 WNT6Q9Y6F9 365 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 A6NLC8 198 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 RAB27BO00194 218 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 PSMD9O00233 223 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 PCDH17O14917 1159 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 CD3EAPO15446 510 aaKnown RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 THAP12O43422 761 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 TIMM44O43615 452 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 RGS10O43665 173 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 RRP9O43818 475 aaKnown RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 ZNF500O60304 480 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 SRGAP2O75044 1071 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 PIAS2O75928 621 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 RASAL1O95294 804 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 IGLV2-14P01704 120 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 A1BGP04217 495 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 FESP07332 822 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 IFIT1P09914 478 aaKnown RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 NPSP0C0P6 89 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 ELFN1P0C7U0 828 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 PECAM1P16284 738 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 ITPKBP27987 946 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 ADORA2AP29274 412 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 DDIT3P35638 169 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 PTDSS1P48651 473 aaKnown RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 NR1H2P55055 460 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 EEFSECP57772 596 aaKnown RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 NHLH1Q02575 133 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 GRM1Q13255 1194 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 TAF12Q16514 161 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 CRTC1Q6UUV9 634 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 KIAA0408Q6ZU52 694 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 RNF44Q7L0R7 432 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 BEND5Q7L4P6 421 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 SLC29A4Q7RTT9 530 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 HERC6Q8IVU3 1022 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 FAM9BQ8IZU0 186 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 LRRC71Q8N4P6 559 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 Q8N9P0 234 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 ABHD11Q8NFV4 315 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 DNAJB14Q8TBM8 379 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 HERVK_113Q902F9 699 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 R3HDM4Q96D70 268 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 SEC62Q99442 399 aaKnown RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 DPCDQ9BVM2 203 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 KATNAL1Q9BW62 490 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 SLC26A6Q9BXS9 759 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 TRIM36Q9NQ86 728 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 IL17RBQ9NRM6 502 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 ASB6Q9NWX5 421 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 DLL3Q9NYJ7 618 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 ARPP21Q9UBL0 812 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 CCNL1Q9UK58 526 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 ST3GAL5Q9UNP4 418 aa3.4□□□□□ -1.87
HMGB1P9-201ENST00000429856 USP22Q9UPT9 525 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms