RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CLUHO75153 1309 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 PLXNA3P51805 1871 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLC12A8A0AV02 714 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 IRAK2O43187 625 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 PRPSAP2O60256 369 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 TBX18O95935 607 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 OAS1P00973 400 aaKnown RBP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 APOEP02649 317 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 HMBSP08397 361 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 MBL2P11226 248 aaPredicted RBP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 FSHRP23945 695 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 MIPP30301 263 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 GBP1P32455 592 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 PCK1P35558 622 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 ATP5C1P36542 298 aaKnown RBP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 CCR2P41597 374 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 HDAC4P56524 1084 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 TBX4P57082 545 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 DLX2Q07687 328 aaPredicted RBP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 HADHQ16836 314 aaKnown RBP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 RAB6CQ53S08 254 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 ODF2Q5BJF6 829 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 PRSS36Q5K4E3 855 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 SNX30Q5VWJ9 437 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 TXNDC8Q6A555 127 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 CC2D1AQ6P1N0 951 aaPredicted RBP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 GET4Q7L5D6 327 aaPredicted RBP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 STRADAQ7RTN6 431 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 UBL4BQ8N7F7 174 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 MAB21L3Q8N8X9 362 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 PPM1EQ8WY54 764 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 GUCD1Q96NT3 240 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 WDR24Q96S15 920 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 NCAPGQ9BPX3 1015 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 ADAM33Q9BZ11 813 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 RAB6CQ9H0N0 254 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 ADAM7Q9H2U9 754 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZWILCHQ9H900 591 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 CLEC1BQ9P126 229 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 PCSK1NQ9UHG2 260 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 DNAI1Q9UI46 699 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 CDH22Q9UJ99 828 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 AMFRQ9UKV5 643 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 PACSIN2Q9UNF0 486 aaPredicted RBP8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 ALG6Q9Y672 507 aa8.24□□□□□ -1.09
HMGA1P4-201ENST00000428643 PTPRDP23468 1912 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CCDC66A2RUB6 948 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CTAGE9A4FU28 777 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 MIF4GDA9UHW6 222 aaKnown RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 H3BQ06 376 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 KIF2AO00139 706 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 NRG2O14511 850 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ENC1O14682 589 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 PSTPIP1O43586 416 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 MOCS2O96007 188 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 F9P00740 461 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 IGLV3-25P01717 112 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 KRT1P04264 644 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 KRT7P08729 469 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 IRF1P10914 325 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLC2A3P11169 496 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 TCF4P15884 667 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 HDCP19113 662 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 KCNA5P22460 613 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 DDX6P26196 483 aaKnown RBP eCLIP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 HOXD11P31277 338 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CCR1P32246 355 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 AVPR1AP37288 418 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 MARCKSL1P49006 195 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 KPNA1P52294 538 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ATXN1P54253 815 aaKnown RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 TAS2R40P59535 323 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ETF1P62495 437 aaKnown RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ITIH3Q06033 890 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 NNTQ13423 1086 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 COL19A1Q14993 1142 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ACAP1Q15027 740 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 RPS6KA1Q15418 735 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 TRIP4Q15650 581 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CTC1Q2NKJ3 1217 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 SMTNL2Q2TAL5 461 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZC3H12AQ5D1E8 599 aaKnown RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 EFHC2Q5JST6 749 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ATAT1Q5SQI0 421 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 KLHDC10Q6PID8 442 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 SYT10Q6XYQ8 523 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 NYAP1Q6ZVC0 841 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLFN11Q7Z7L1 901 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 NT5DC3Q86UY8 548 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 RHOT1Q8IXI2 618 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ARFGAP1Q8N6T3 406 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ARL14EPQ8N8R7 260 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ITFG1Q8TB96 612 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 HSPH1Q92598 858 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZNF592Q92610 1267 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CENPIQ92674 756 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 NT5C3BQ969T7 300 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 RIPOR3Q96MK2 946 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms