RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 ETNK2Q9NVF9 386 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 C2orf71A6NGG8 1288 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 SLC15A5A6NIM6 579 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 DYNC1LI2O43237 492 aaPredicted RBP14.81□□□□□ -0.04
LIG1-202ENST00000427526 STAU1O95793 577 aaKnown RBP14.81□□□□□ -0.04
LIG1-202ENST00000427526 LMNAP02545 664 aaKnown RBP14.81□□□□□ -0.04
LIG1-202ENST00000427526 MAGEA3P43357 314 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 HSF5Q4G112 596 aaPredicted RBP14.81□□□□□ -0.04
LIG1-202ENST00000427526 OLFML1Q6UWY5 402 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 IFNLR1Q8IU57 520 aaPredicted RBP14.81□□□□□ -0.04
LIG1-202ENST00000427526 C12orf29Q8N999 325 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 CFAP61Q8NHU2 1237 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 LENG1Q96BZ8 264 aaPredicted RBP14.81□□□□□ -0.04
LIG1-202ENST00000427526 MIS12Q9H081 205 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 GPATCH2LQ9NWQ4 482 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 HEY1Q9Y5J3 304 aa14.81□□□□□ -0.04
LIG1-202ENST00000427526 FAM237BA0A1B0GVD1 139 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 APOL1O14791 398 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 SMNDC1O75940 238 aaKnown RBP eCLIP14.8□□□□□ -0.041e-10■■■□□ 18.1
LIG1-202ENST00000427526 KRT37O76014 449 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 MYL2P10916 166 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 CCNFP41002 786 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 BCAR1P56945 870 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 TMEM62Q0P6H9 643 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 CA9Q16790 459 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 FAXCQ5TGI0 409 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 CES4AQ5XG92 561 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 RINLQ6ZS11 566 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 CTAGE3PQ8IX95 158 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 OXNAD1Q96HP4 312 aaPredicted RBP14.8□□□□□ -0.04
LIG1-202ENST00000427526 NMRK2Q9NPI5 230 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 TAS2R1Q9NYW7 299 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 GINS2Q9Y248 185 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 H0Y3Z8 333 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 TMEM132DQ14C87 1099 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 PKDCCQ504Y2 493 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 IQSEC1Q6DN90 963 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 PMF1Q6P1K2 205 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 TTC7BQ86TV6 843 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 MCUQ8NE86 351 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 LRRC39Q96DD0 335 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 NT5C1AQ9BXI3 368 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 KLC2Q9H0B6 622 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 MKS1Q9NXB0 559 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 FLRT1Q9NZU1 646 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 ITGA11Q9UKX5 1188 aa14.8□□□□□ -0.04
LIG1-202ENST00000427526 GYG2O15488 501 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 LUC7L3O95232 432 aaKnown RBP14.79□□□□□ -0.04
LIG1-202ENST00000427526 APRTP07741 180 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 NEFHP12036 1026 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 GCKP35557 465 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 DGKDQ16760 1214 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 SCYL2Q6P3W7 929 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 FAM172AQ8WUF8 416 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 APBB2Q92870 758 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 C7orf26Q96N11 449 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 TBCBQ99426 244 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 HMX2A2RU54 273 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 UGT1A9O60656 530 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 ZBED1O96006 694 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 APOEP02649 317 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 GSTA2P09210 222 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 PAX7P23759 505 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 RBP5P82980 135 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 ZBTB16Q05516 673 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 UNC5AQ6ZN44 842 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 ZNF534Q76KX8 674 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 SIGLEC10Q96LC7 697 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 MECRQ9BV79 373 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 SNRNP25Q9BV90 132 aaKnown RBP14.79□□□□□ -0.04
LIG1-202ENST00000427526 UGT1A7Q9HAW7 530 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 UGT1A10Q9HAW8 530 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 UGT1A8Q9HAW9 530 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 SLC24A3Q9HC58 644 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 ARHGEF4Q9NR80 690 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 DPP3Q9NY33 737 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 SIRPGQ9P1W8 387 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 C2CD2Q9Y426 696 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 FCHO1O14526 889 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 MDM4O15151 490 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 GABBR2O75899 941 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 MAP3K6O95382 1288 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 RARBP10826 455 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 ATP6V1C1P21283 382 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 RGS7P49802 495 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 KIZQ2M2Z5 673 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 PPP1R26Q5T8A7 1209 aaPredicted RBP14.79□□□□□ -0.04
LIG1-202ENST00000427526 LGSNQ5TDP6 509 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 TMEM110Q86TL2 294 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 TTC39CQ8N584 583 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 TEX9Q8N6V9 391 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 CCDC110Q8TBZ0 833 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 LRRN4Q8WUT4 740 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 ZNF670Q9BS34 389 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 SLC4A5Q9BY07 1137 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 NMUR2Q9GZQ4 415 aa14.79□□□□□ -0.04
LIG1-202ENST00000427526 IQCGQ9H095 443 aaKnown RBP14.79□□□□□ -0.04
LIG1-202ENST00000427526 FAM49AQ9H0Q0 323 aaPredicted RBP14.79□□□□□ -0.04
LIG1-202ENST00000427526 MMADHCQ9H3L0 296 aaPredicted RBP14.79□□□□□ -0.04
LIG1-202ENST00000427526 NGRNQ9NPE2 291 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms