RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 GLT8D2Q9H1C3 349 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 RAD21L1Q9H4I0 556 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 EPS8L2Q9H6S3 715 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 HOMER2Q9NSB8 354 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 DNAJC28Q9NX36 388 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 GDAP2Q9NXN4 497 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PKD2L2Q9NZM6 624 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 GCNT4Q9P109 453 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 STRIP2Q9ULQ0 834 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 DOLKQ9UPQ8 538 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 GNEQ9Y223 722 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CAB39Q9Y376 341 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PCDHB4Q9Y5E5 795 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 DLEC1Q9Y238 1755 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ARFGEF2Q9Y6D5 1785 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 GAKO14976 1311 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 SIPA1L3O60292 1781 aaPredicted RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TRIM64BA6NI03 449 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 UNCXA6NJT0 531 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 POC1B-GALNT4F8VUJ3 575 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 DNALI1O14645 258 aaPredicted RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ARHGEF9O43307 516 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PSTPIP1O43586 416 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 LILRB3O75022 631 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 GCATO75600 419 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 SERPINI2O75830 405 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 BBOX1O75936 387 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PTTG1O95997 202 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 LDHCP07864 332 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 DHRS4L1P0CG22 281 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 RALBP11234 206 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 FCGR1AP12314 374 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 FCER1AP12319 257 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 KRT10P13645 584 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 GAP43P17677 238 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 IMPDH1P20839 514 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 NR2F2P24468 414 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PON1P27169 355 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PCSK6P29122 969 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CTHP32929 405 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PTGS2P35354 604 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 HOXD13P35453 343 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PIK3CAP42336 1068 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZAP70P43403 619 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 RXRGP48443 463 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 SERPINB9P50453 376 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF132P52740 706 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TIMM10P62072 90 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 S100A12P80511 92 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TMPRSS15P98073 1019 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PPARDQ03181 441 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 COASYQ13057 564 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TCIRG1Q13488 830 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 NCOA4Q13772 614 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 SEC23AQ15436 765 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ARHGAP44Q17R89 818 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 LRRC36Q1X8D7 754 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ANO4Q32M45 955 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 LSM12Q3MHD2 195 aaKnown RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TIGD2Q4W5G0 525 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 FAM47CQ5HY64 1035 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 DCAF12L1Q5VU92 463 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 LPCAT4Q643R3 524 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PGM2L1Q6PCE3 622 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TTC33Q6PID6 262 aaPredicted RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 BNC2Q6ZN30 1099 aaPredicted RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PLEKHG7Q6ZR37 379 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 NLRP10Q86W26 655 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 DGKHQ86XP1 1220 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CAMK1DQ8IU85 385 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 LURAP1LQ8IV03 231 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CHERPQ8IWX8 916 aaKnown RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 FAM20CQ8IXL6 584 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CLYBLQ8N0X4 340 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 BANPQ8N9N5 519 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 GALNT11Q8NCW6 608 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 GSTCDQ8NEC7 633 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TBC1D15Q8TC07 691 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 XAGE3Q8WTP9 111 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 OSCP1Q8WVF1 389 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TRIB2Q92519 343 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CELF1Q92879 486 aaKnown RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 PEX13Q92968 403 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TP53INP1Q96A56 240 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 E2F7Q96AV8 911 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CCDC127Q96BQ5 260 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CLIP3Q96DZ5 547 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF486Q96H40 463 aaPredicted RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF597Q96LX8 424 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 RANBP9Q96S59 729 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CCDC106Q9BWC9 280 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 GON7Q9BXV9 100 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF341Q9BYN7 854 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ANO3Q9BYT9 981 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLC2A11Q9BYW1 496 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 DNAI2Q9GZS0 605 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 UPF3AQ9H1J1 476 aaKnown RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ACSS3Q9H6R3 686 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 DNAJC18Q9H819 358 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 GPN2Q9H9Y4 310 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms