RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 ARHGAP18Q8N392 663 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 GUF1Q8N442 669 aaKnown RBP13.55□□□□□ -0.24
NELFE-203ENST00000426722 UCMAQ8WVF2 138 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 FOXJ1Q92949 421 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 ACOX2Q99424 681 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 SCNM1Q9BWG6 230 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 TMEM121BQ9BXQ6 578 aaPredicted RBP13.55□□□□□ -0.24
NELFE-203ENST00000426722 APOBEC3GQ9HC16 384 aaKnown RBP13.55□□□□□ -0.24
NELFE-203ENST00000426722 TMEM8AQ9HCN3 771 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 NAGPAQ9UK23 515 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 NEUROG3Q9Y4Z2 214 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 GNSP15586 552 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 SYKP43405 635 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 GCLMP48507 274 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 KRT85P78386 507 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 PPP3CAQ08209 521 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 SLC14A1Q13336 389 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 ADAM9Q13443 819 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 STARD3Q14849 445 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 WDR45BQ5MNZ6 344 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 PPP1R26Q5T8A7 1209 aaPredicted RBP13.54□□□□□ -0.24
NELFE-203ENST00000426722 KIAA1211LQ6NV74 962 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 TOGARAM2Q6ZUX3 1019 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 SLC41A1Q8IVJ1 513 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 FAM186BQ8IYM0 893 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 TRIML1Q8N9V2 468 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 TAS1R2Q8TE23 839 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 MRGPRX1Q96LB2 322 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 SPATA32Q96LK8 384 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 DNAAF2Q9NVR5 837 aaKnown RBP13.54□□□□□ -0.24
NELFE-203ENST00000426722 ZMIZ1Q9ULJ6 1067 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 CYP8B1Q9UNU6 501 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 NFE2L3Q9Y4A8 694 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 ATXN2Q99700 1313 aaKnown RBP13.54□□□□□ -0.24
NELFE-203ENST00000426722 GON4LQ3T8J9 2241 aa13.54□□□□□ -0.24
NELFE-203ENST00000426722 MDM4O15151 490 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 STX10O60499 249 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 PENKP01210 267 aaPredicted RBP13.53□□□□□ -0.24
NELFE-203ENST00000426722 CYBBP04839 570 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 CD58P19256 250 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 SLC8A3P57103 927 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 DPYDQ12882 1025 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 ENPP2Q13822 863 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 SCD5Q86SK9 330 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 RGL4Q8IZJ4 473 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 CPXM2Q8N436 756 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 MINDY1Q8N5J2 469 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 GATA6Q92908 595 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 JAKMIP2Q96AA8 810 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 CCDC34Q96HJ3 373 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 HEXIM2Q96MH2 286 aaKnown RBP13.53□□□□□ -0.24
NELFE-203ENST00000426722 HSPA12BQ96MM6 686 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 GTPBP2Q9BX10 602 aaKnown RBP13.53□□□□□ -0.24
NELFE-203ENST00000426722 ZDHHC5Q9C0B5 715 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 THAP10Q9P2Z0 257 aaPredicted RBP13.53□□□□□ -0.24
NELFE-203ENST00000426722 NUDT5Q9UKK9 219 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 MSRB2Q9Y3D2 182 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 STON1Q9Y6Q2 735 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 EPG5Q9HCE0 2579 aa13.53□□□□□ -0.24
NELFE-203ENST00000426722 FAM221BA6H8Z2 402 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 TIMM44O43615 452 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 TRIM49P0CI25 452 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 TRIM49CP0CI26 452 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 CD6P30203 668 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 OXTRP30559 389 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 MFAP3P55082 362 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 PKP1Q13835 747 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 EIF4HQ15056 248 aaKnown RBP13.52□□□□□ -0.25
NELFE-203ENST00000426722 EDRF1Q3B7T1 1238 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 RAB41Q5JT25 222 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 FYB2Q5VWT5 728 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 ARHGAP17Q68EM7 881 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 DEFB119Q8N690 84 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 FBXL13Q8NEE6 735 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 CADM4Q8NFZ8 388 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 SLC2A11Q9BYW1 496 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 PRDM16Q9HAZ2 1276 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 ITM2CQ9NQX7 267 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 CACNA2D2Q9NY47 1150 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.25
NELFE-203ENST00000426722 PLK2Q9NYY3 685 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 RASAL2Q9UJF2 1139 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 STRIP2Q9ULQ0 834 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 RAD54BQ9Y620 910 aa13.52□□□□□ -0.25
NELFE-203ENST00000426722 CKAP5Q14008 2032 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 KLKB1P03952 638 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 SPINK2P20155 84 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 CORO1AP31146 461 aaKnown RBP13.51□□□□□ -0.25
NELFE-203ENST00000426722 ZNF445P59923 1031 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 SIM1P81133 766 aaPredicted RBP13.51□□□□□ -0.25
NELFE-203ENST00000426722 EFEMP1Q12805 493 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 ZNF423Q2M1K9 1284 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 PLEKHG6Q3KR16 790 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 ZNF394Q53GI3 561 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 KIAA1324Q6UXG2 1013 aaKnown RBP13.51□□□□□ -0.25
NELFE-203ENST00000426722 KRBA2Q6ZNG9 492 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 ANKS1BQ7Z6G8 1248 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 ANKRD52Q8NB46 1076 aa13.51□□□□□ -0.25
NELFE-203ENST00000426722 DNASE2BQ8WZ79 361 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms