RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 C3orf20Q8ND61 904 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 NHEJ1Q9H9Q4 299 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-209ENST00000425836 METTL5Q9NRN9 209 aaKnown RBP25.54■■□□□ 1.68
VEGFA-209ENST00000425836 DUS2Q9NX74 493 aaKnown RBP25.54■■□□□ 1.68
VEGFA-209ENST00000425836 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.54■■□□□ 1.684e-6■□□□□ 10.5
VEGFA-209ENST00000425836 IMPACTQ9P2X3 320 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 NENFQ9UMX5 172 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 TNFRSF10AO00220 468 aa25.53■■□□□ 1.68
VEGFA-209ENST00000425836 GJB6O95452 261 aa25.53■■□□□ 1.68
VEGFA-209ENST00000425836 FLT3P36888 993 aa25.53■■□□□ 1.68
VEGFA-209ENST00000425836 GFPT1Q06210 699 aaPredicted RBP25.53■■□□□ 1.68
VEGFA-209ENST00000425836 TRIP4Q15650 581 aaPredicted RBP25.53■■□□□ 1.68
VEGFA-209ENST00000425836 TRIM68Q6AZZ1 485 aa25.53■■□□□ 1.68
VEGFA-209ENST00000425836 ALKBH5Q6P6C2 394 aaKnown RBP25.53■■□□□ 1.68
VEGFA-209ENST00000425836 SERPINB11Q96P15 392 aa25.53■■□□□ 1.68
VEGFA-209ENST00000425836 PANX2Q96RD6 677 aa25.53■■□□□ 1.68
VEGFA-209ENST00000425836 TRUB2O95900 331 aaKnown RBP25.52■■□□□ 1.68
VEGFA-209ENST00000425836 IGLV3-25P01717 112 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 KLKB1P03952 638 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 KRT3P12035 628 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 KPNA1P52294 538 aaPredicted RBP25.52■■□□□ 1.68
VEGFA-209ENST00000425836 TNK2Q07912 1038 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 PDGFRLQ15198 375 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 SLC18A3Q16572 532 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 CCDC122Q5T0U0 273 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 TRNP1Q6NT89 227 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 EDAQ92838 391 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 PLD4Q96BZ4 506 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 CCDC42Q96M95 316 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 DDX23Q9BUQ8 820 aaKnown RBP25.52■■□□□ 1.68
VEGFA-209ENST00000425836 DEF6Q9H4E7 631 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 TRPV5Q9NQA5 729 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 SIGLEC16A6NMB1 481 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 ALADP13716 330 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 ARSAP15289 507 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 IFNAR2P48551 515 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 PFKPQ01813 784 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 NNTQ13423 1086 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 EIF4EBP2Q13542 120 aaPredicted RBP25.52■■□□□ 1.68
VEGFA-209ENST00000425836 EML3Q32P44 896 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 Q6ZNB5 142 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 BBS7Q8IWZ6 715 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 EMC1Q8N766 993 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 JOSD2Q8TAC2 188 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 SELENOOQ9BVL4 669 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 EBF3Q9H4W6 596 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 HPS4Q9NQG7 708 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 TBC1D14Q9P2M4 693 aa25.52■■□□□ 1.68
VEGFA-209ENST00000425836 LSM7Q9UK45 103 aaKnown RBP25.52■■□□□ 1.68
VEGFA-209ENST00000425836 MYO10Q9HD67 2058 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 PI4K2BG5E9Z4 385 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 SLC9A3R1O14745 358 aaPredicted RBP25.51■■□□□ 1.67
VEGFA-209ENST00000425836 AKR1B10O60218 316 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 IGLV3-27P01718 113 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 CORO1AP31146 461 aaKnown RBP25.51■■□□□ 1.67
VEGFA-209ENST00000425836 TBX4P57082 545 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 IER5LQ5T953 404 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 DNAJC24Q6P3W2 148 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 DNASE1L2Q92874 299 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 NT5C3BQ969T7 300 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 NPY6RQ99463 290 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 ADAM33Q9BZ11 813 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 RRN3Q9NYV6 651 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 GTSE1Q9NYZ3 720 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 TLR6Q9Y2C9 796 aa25.51■■□□□ 1.67
VEGFA-209ENST00000425836 MUC3AQ02505 3323 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 IRAK2O43187 625 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 ATMINO43313 823 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-209ENST00000425836 RFC1P35251 1148 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-209ENST00000425836 RING1Q06587 406 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 PPP1R15BQ5SWA1 713 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 OTUD1Q5VV17 481 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-209ENST00000425836 PLEKHA7Q6IQ23 1121 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 ADGRG2Q8IZP9 1017 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 SLC39A13Q96H72 371 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 FCRL2Q96LA5 508 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-209ENST00000425836 DCLK3Q9C098 648 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 FAM204AQ9H8W3 233 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 WNT16Q9UBV4 365 aa25.5■■□□□ 1.67
VEGFA-209ENST00000425836 C2CD4BA6NLJ0 364 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 MYBL1P10243 752 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 TFE3P19532 575 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-209ENST00000425836 HARS2P49590 506 aaKnown RBP25.49■■□□□ 1.67
VEGFA-209ENST00000425836 MAMLD1Q13495 774 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 RUNX3Q13761 415 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 SLC25A52Q3SY17 297 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 CSGALNACT1Q8TDX6 532 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 RXFP2Q8WXD0 754 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 ZNF653Q96CK0 615 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 OTUB2Q96DC9 234 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 TRIM11Q96F44 468 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 CFAP57Q96MR6 1250 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 PARVAQ9NVD7 372 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 DDIT4Q9NX09 232 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 CALCOCO1Q9P1Z2 691 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 CNOT8Q9UFF9 292 aaKnown RBP25.49■■□□□ 1.67
VEGFA-209ENST00000425836 AGO1Q9UL18 857 aaKnown RBP25.49■■□□□ 1.67
VEGFA-209ENST00000425836 STAP1Q9ULZ2 295 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 TTC28Q96AY4 2481 aa25.49■■□□□ 1.67
VEGFA-209ENST00000425836 OTOL1A6NHN0 477 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms