RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CYP26A1O43174 497 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 COCHO43405 550 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 TLR5O60602 858 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 GNA14O95837 355 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 TBXAS1P24557 533 aaPredicted RBP13.39□□□□□ -0.27
SGCE-203ENST00000425444 TUBP50607 506 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 GALK1P51570 392 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 SLC8A3P57103 927 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 ARMCX6Q7L4S7 300 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 SLC4A11Q8NBS3 891 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 CD101Q93033 1021 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 GTPBP2Q9BX10 602 aaKnown RBP13.39□□□□□ -0.27
SGCE-203ENST00000425444 LINC00597Q9H2U6 94 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 FAM124BQ9H5Z6 455 aaPredicted RBP13.39□□□□□ -0.27
SGCE-203ENST00000425444 PNPLA8Q9NP80 782 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 IL37Q9NZH6 218 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 MBD1Q9UIS9 605 aaPredicted RBP13.39□□□□□ -0.27
SGCE-203ENST00000425444 SCML2Q9UQR0 700 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 PTPN13Q12923 2485 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 ADAMTS9Q9P2N4 1935 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 COL12A1Q99715 3063 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 FGFR1OPO95684 399 aaKnown RBP13.38□□□□□ -0.27
SGCE-203ENST00000425444 CFIP05156 583 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 ZDHHC11BP0C7U3 371 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 IRF1P10914 325 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 RAD23BP54727 409 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 SNX30Q5VWJ9 437 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 NAIF1Q69YI7 327 aaPredicted RBP13.38□□□□□ -0.27
SGCE-203ENST00000425444 ANO7Q6IWH7 933 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 FOXR2Q6PJQ5 311 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 CCNI2Q6ZMN8 369 aaPredicted RBP13.38□□□□□ -0.27
SGCE-203ENST00000425444 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 SYT12Q8IV01 421 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 SRRTQ9BXP5 876 aaKnown RBP13.38□□□□□ -0.27
SGCE-203ENST00000425444 DUSP16Q9BY84 665 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 TMEM74BQ9NUR3 256 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 KIAA1468Q9P260 1216 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 PLXNB3Q9ULL4 1909 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 MYO16Q9Y6X6 1858 aa13.38□□□□□ -0.27
SGCE-203ENST00000425444 HHLA1C9JL84 531 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 MAP3K13O43283 966 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 OPHN1O60890 802 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 ADH1CP00326 375 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 CYP17A1P05093 508 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 CD19P15391 556 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 GOLGA8FQ08AF8 430 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 GOLGA8DPQ0D2H9 430 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 GOLGA7BQ2TAP0 167 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 SGO2Q562F6 1265 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 ARHGAP17Q68EM7 881 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 TTC30AQ86WT1 665 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 PPM1KQ8N3J5 372 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 KIAA1958Q8N8K9 716 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 ZFRQ96KR1 1074 aaKnown RBP13.37□□□□□ -0.27
SGCE-203ENST00000425444 FSCN3Q9NQT6 498 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 TBC1D14Q9P2M4 693 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 HESX1Q9UBX0 185 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 NAGPAQ9UK23 515 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
SGCE-203ENST00000425444 MYH10P35580 1976 aa13.37□□□□□ -0.27
SGCE-203ENST00000425444 PTPRQQ9UMZ3 2332 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 KNTC1P50748 2209 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 A0A1W2PQH9 124 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 E2F8A0AVK6 867 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 P4HA2O15460 535 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 AFPP02771 609 aaKnown RBP13.36□□□□□ -0.27
SGCE-203ENST00000425444 RARGP13631 454 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 PLA2G2AP14555 144 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 ATP5C1P36542 298 aaKnown RBP13.36□□□□□ -0.27
SGCE-203ENST00000425444 PTGER3P43115 390 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 PGFP49763 221 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 KIF11P52732 1056 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 KCNH2Q12809 1159 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 HNRNPDQ14103 355 aaKnown RBP13.36□□□□□ -0.27
SGCE-203ENST00000425444 DHCR24Q15392 516 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 TRIP6Q15654 476 aaKnown RBP13.36□□□□□ -0.27
SGCE-203ENST00000425444 SLC23A3Q6PIS1 610 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 TADA2BQ86TJ2 420 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 TRIM59Q8IWR1 403 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 TMEFF1Q8IYR6 380 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 PNPLA1Q8N8W4 532 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 ADAMTS14Q8WXS8 1223 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 CRELD1Q96HD1 420 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
SGCE-203ENST00000425444 UBL7Q96S82 380 aaPredicted RBP13.36□□□□□ -0.27
SGCE-203ENST00000425444 CYLDQ9NQC7 956 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 LSM7Q9UK45 103 aaKnown RBP13.36□□□□□ -0.27
SGCE-203ENST00000425444 TSPAN16Q9UKR8 245 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 PCDHB4Q9Y5E5 795 aa13.36□□□□□ -0.27
SGCE-203ENST00000425444 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
SGCE-203ENST00000425444 PMM2O15305 246 aa13.35□□□□□ -0.27
SGCE-203ENST00000425444 C1QL1O75973 258 aa13.35□□□□□ -0.27
SGCE-203ENST00000425444 TBX18O95935 607 aa13.35□□□□□ -0.27
SGCE-203ENST00000425444 RALAP11233 206 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms