RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SV2CQ496J9 727 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 KIAA0319Q5VV43 1072 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 SLC9A4Q6AI14 798 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 TRMT10BQ6PF06 316 aaKnown RBP11.99□□□□□ -0.49
UBR4-207ENST00000425413 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 CRYBG2Q8N1P7 616 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 TEKT4Q8WW24 435 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 TTC17Q96AE7 1141 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 FAM111AQ96PZ2 611 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 KRT82Q9NSB4 513 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 DTLQ9NZJ0 730 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 SLC17A6Q9P2U8 582 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 SMG5Q9UPR3 1016 aaKnown RBP11.99□□□□□ -0.49
UBR4-207ENST00000425413 STK38LQ9Y2H1 464 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 MYO18AQ92614 2054 aaKnown RBP11.98□□□□□ -0.49
UBR4-207ENST00000425413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.98□□□□□ -0.49
UBR4-207ENST00000425413 PRPF4O43172 522 aaKnown RBP eCLIP11.98□□□□□ -0.499e-7■■□□□ 11.6
UBR4-207ENST00000425413 TGM2P21980 687 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 SNX16P57768 344 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 AP1B1Q10567 949 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 OLIG2Q13516 323 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 E2F5Q15329 346 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 PARP9Q8IXQ6 854 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 VPS52Q8N1B4 723 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 SIX6OS1Q8N1H7 587 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 GPATCH11Q8N954 259 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 TNIP3Q96KP6 325 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 ZNF670Q9BS34 389 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 SLC13A1Q9BZW2 595 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 NPHS2Q9NP85 383 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 DDX43Q9NXZ2 648 aaKnown RBP11.98□□□□□ -0.49
UBR4-207ENST00000425413 TRIM49D1C9J1S8 452 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 NDC80O14777 642 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 MDM4O15151 490 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 LPXNO60711 386 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 PTPN1P18031 435 aaKnown RBP11.98□□□□□ -0.49
UBR4-207ENST00000425413 ARL4AP40617 200 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 CRYBB1P53674 252 aaPredicted RBP11.98□□□□□ -0.49
UBR4-207ENST00000425413 HEATR6Q6AI08 1181 aaKnown RBP11.98□□□□□ -0.49
UBR4-207ENST00000425413 ZNF75CPQ92670 426 aaPredicted RBP11.98□□□□□ -0.49
UBR4-207ENST00000425413 IL1RAPL1Q9NZN1 696 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 BAIAP2L1Q9UHR4 511 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 SLC12A4Q9UP95 1085 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 CDY2AQ9Y6F7 541 aa11.98□□□□□ -0.49
UBR4-207ENST00000425413 DCAF8L1A6NGE4 600 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 NRP1O14786 923 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CAPN9O14815 690 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CHADO15335 359 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 XPOTO43592 962 aaKnown RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 MFSD11O43934 449 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 PTPN9P43378 593 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CLCNKBP51801 687 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 TKTL1P51854 596 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CACNA2D1P54289 1103 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SLC8A3P57103 927 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SESN2P58004 480 aaPredicted RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 IRX4P78413 519 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CDC42EP1Q00587 391 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 IFRD2Q12894 506 aaPredicted RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 SNCBQ16143 134 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 DPYSL2Q16555 572 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 NCBP2-AS2Q69YL0 99 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 PAQR9Q6ZVX9 377 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SLC7A14Q8TBB6 771 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 STK32AQ8WU08 396 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 EDEM1Q92611 657 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 PTPRN2Q92932 1015 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 ERP27Q96DN0 273 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SENP8Q96LD8 212 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 NMRK2Q9NPI5 230 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SMYD2Q9NRG4 433 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 MIOSQ9NXC5 875 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SENP1Q9P0U3 644 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 ST3GAL5Q9UNP4 418 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 MYBPHLA2RUH7 354 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 KCNK1O00180 336 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 TOP3BO95985 862 aaKnown RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 F7P08709 466 aaPredicted RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 GHRP10912 638 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 VAV1P15498 845 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SCNN1GP51170 649 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 NCALDP61601 193 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 PURAQ00577 322 aaKnown RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 PDK4Q16654 411 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SLC45A4Q5BKX6 768 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 GPRIN1Q7Z2K8 1008 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CDKL3Q8IVW4 592 aaPredicted RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 C3orf58Q8NDZ4 430 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 ULBP1Q9BZM6 244 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 TMEM30AQ9NV96 361 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 GDAP2Q9NXN4 497 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 SNX10Q9Y5X0 201 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 BCLAF3A2AJT9 711 aaKnown RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 HAS3O00219 553 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 AMHP03971 560 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 KCNE1P15382 129 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 MATKP42679 507 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 MROH9Q5TGP6 573 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms