RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ANKS1BQ7Z6G8 1248 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CCDC117Q8IWD4 279 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CCDC34Q96HJ3 373 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 HEXIM2Q96MH2 286 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CIPCQ9C0C6 399 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TM7SF3Q9NS93 570 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 OLA1Q9NTK5 396 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TMEM30AQ9NV96 361 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ELOVL2Q9NXB9 296 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PLK2Q9NYY3 685 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 THAP10Q9P2Z0 257 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 NCKAP1Q9Y2A7 1128 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 A0A1W2PQH9 124 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TRIM24O15164 1050 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DFNA5O60443 496 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 STX10O60499 249 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MYL1P05976 194 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 EPHX1P07099 455 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CISD3P0C7P0 127 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CASP4P49662 377 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 VAMP7P51809 220 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GRIK2Q13002 908 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ORC1Q13415 861 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZACNQ401N2 412 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FUT11Q495W5 492 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MPPE1Q53F39 396 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 INTS8Q75QN2 995 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SV2AQ7L0J3 742 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ADAT2Q7Z6V5 191 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GLRX5Q86SX6 157 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZNF557Q8N988 423 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 C12orf29Q8N999 325 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 RNF139Q8WU17 664 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SNX19Q92543 992 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ERLEC1Q96DZ1 483 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DUSP16Q9BY84 665 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 UBXN6Q9BZV1 441 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FBRSQ9HAH7 460 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 USP25Q9UHP3 1055 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FBXO10Q9UK96 956 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PCDHGB2Q9Y5G2 931 aa12.88□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CNOT1A5YKK6 2376 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 WASH3PC4AMC7 463 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 STC2O76061 302 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 BEST1O76090 585 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 NR3C1P04150 777 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ATP5BP06576 529 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 HMBSP08397 361 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TPMTP51580 245 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 AFF3P51826 1226 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 KIF11P52732 1056 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FAM193AP78312 1265 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 EFEMP1Q12805 493 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CCNI2Q6ZMN8 369 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CLEC20AQ6ZU45 233 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CCDC186Q7Z3E2 898 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZCCHC9Q8N567 271 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PNPLA1Q8N8W4 532 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZMIZ2Q8NF64 920 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 OR2I1PQ8NGU4 316 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TMEM174Q8WUU8 243 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FAXDC2Q96IV6 333 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CAMK1GQ96NX5 476 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 USP36Q9P275 1121 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SUN2Q9UH99 717 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PCOLCE2Q9UKZ9 415 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DENND4CQ5VZ89 1909 aa12.87□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ABCA7Q8IZY2 2146 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MAP1BP46821 2468 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SLC12A8A0AV02 714 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 K7ELQ4 463 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MAPK13O15264 365 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CYP26A1O43174 497 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 RNASEH1O60930 286 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 VNN1O95497 513 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DNTTP04053 509 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CDK4P11802 303 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CD58P19256 250 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CORO1AP31146 461 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MFAP3P55082 362 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZBTB16Q05516 673 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CUL4BQ13620 913 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 HLA-BQ31612 363 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TTC31Q49AM3 519 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 C19orf48Q6RUI8 117 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DENND1CQ8IV53 801 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CPXM2Q8N436 756 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 OR2T3Q8NH03 318 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 WFIKKN2Q8TEU8 576 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 WBP2Q969T9 261 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TMA16Q96EY4 203 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms