RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 BSPRYQ5W0U4 402 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 GRAMD4Q6IC98 578 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 NUDT18Q6ZVK8 323 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 ERMP1Q7Z2K6 904 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 IRF2BP1Q8IU81 584 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 MLKLQ8NB16 471 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 TPSD1Q9BZJ3 242 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 DCLK3Q9C098 648 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 DUSP15Q9H1R2 295 aaPredicted RBP22.56■■□□□ 1.2
CDCP1-202ENST00000425231 CNGB3Q9NQW8 809 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 FBXO10Q9UK96 956 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 AGO1Q9UL18 857 aaKnown RBP22.56■■□□□ 1.2
CDCP1-202ENST00000425231 STRIP2Q9ULQ0 834 aa22.56■■□□□ 1.2
CDCP1-202ENST00000425231 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.56■■□□□ 1.2
CDCP1-202ENST00000425231 SLC12A8A0AV02 714 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 DAOAP59103 153 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 STILQ15468 1287 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 TOGARAM2Q6ZUX3 1019 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 SIX6OS1Q8N1H7 587 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 ZNF513Q8N8E2 541 aaPredicted RBP22.55■■□□□ 1.2
CDCP1-202ENST00000425231 BHMTQ93088 406 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 ARRDC1-AS1Q9H2J1 176 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 CLSTN2Q9H4D0 955 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 OLA1Q9NTK5 396 aaKnown RBP22.55■■□□□ 1.2
CDCP1-202ENST00000425231 PLK2Q9NYY3 685 aa22.55■■□□□ 1.2
CDCP1-202ENST00000425231 PRRT4C9JH25 899 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 EPN2O95208 641 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 LCP1P13796 627 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 CHKAP35790 457 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 RGS7P49802 495 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 TRIP4Q15650 581 aaPredicted RBP22.54■■□□□ 1.2
CDCP1-202ENST00000425231 FYB2Q5VWT5 728 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 PRR23CQ6ZRP0 262 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 DENND1CQ8IV53 801 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 EDEM1Q92611 657 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 UBE2TQ9NPD8 197 aaPredicted RBP22.54■■□□□ 1.2
CDCP1-202ENST00000425231 ABCC13Q9NSE7 274 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 INVSQ9Y283 1065 aa22.54■■□□□ 1.2
CDCP1-202ENST00000425231 M0QYV0 167 aa22.53■■□□□ 1.2
CDCP1-202ENST00000425231 PENKP01210 267 aaPredicted RBP22.53■■□□□ 1.2
CDCP1-202ENST00000425231 DGKGP49619 791 aa22.53■■□□□ 1.2
CDCP1-202ENST00000425231 USP39Q53GS9 565 aaKnown RBP22.53■■□□□ 1.2
CDCP1-202ENST00000425231 OLIG1Q8TAK6 271 aa22.53■■□□□ 1.2
CDCP1-202ENST00000425231 PLD4Q96BZ4 506 aa22.53■■□□□ 1.2
CDCP1-202ENST00000425231 POLMQ9NP87 494 aaPredicted RBP22.53■■□□□ 1.2
CDCP1-202ENST00000425231 SFMBT1Q9UHJ3 866 aa22.53■■□□□ 1.2
CDCP1-202ENST00000425231 CACNA1AO00555 2505 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 PIK3R2O00459 728 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 ALDH1A2O94788 518 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 FOXK2Q01167 660 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 TRIM65Q6PJ69 517 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 CLEC17AQ6ZS10 378 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 TRMT11Q7Z4G4 463 aaKnown RBP22.52■■□□□ 1.2
CDCP1-202ENST00000425231 CREBRFQ8IUR6 639 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 FMNL3Q8IVF7 1028 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 FAM217AQ8IXS0 508 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 CPXM2Q8N436 756 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 RNF139Q8WU17 664 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 HSFY1Q96LI6 401 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 CRACR2AQ9BSW2 395 aa22.52■■□□□ 1.2
CDCP1-202ENST00000425231 ABCA7Q8IZY2 2146 aa22.52■■□□□ 1.19
CDCP1-202ENST00000425231 SLC9A1P19634 815 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 SDHBP21912 280 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 GPD2P43304 727 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 ATXN1P54253 815 aaKnown RBP22.51■■□□□ 1.19
CDCP1-202ENST00000425231 CCDC6Q16204 474 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 PLA2G2CQ5R387 149 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 EGFLAMQ63HQ2 1017 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 DGLUCYQ7Z3D6 616 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 IRGQQ8WZA9 623 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 ACOX2Q99424 681 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 SLC27A6Q9Y2P4 619 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 HBS1LQ9Y450 684 aaKnown RBP22.51■■□□□ 1.19
CDCP1-202ENST00000425231 PCDHGA5Q9Y5G8 931 aa22.51■■□□□ 1.19
CDCP1-202ENST00000425231 RHOBTB1O94844 696 aa22.5■■□□□ 1.19
CDCP1-202ENST00000425231 ZNF806P0C7X5 589 aa22.5■■□□□ 1.19
CDCP1-202ENST00000425231 KRT5P13647 590 aa22.5■■□□□ 1.19
CDCP1-202ENST00000425231 NTSR1P30989 418 aa22.5■■□□□ 1.19
CDCP1-202ENST00000425231 RPL34P49207 117 aaKnown RBP22.5■■□□□ 1.19
CDCP1-202ENST00000425231 ELF2Q15723 593 aa22.5■■□□□ 1.19
CDCP1-202ENST00000425231 GJB7Q6PEY0 223 aa22.5■■□□□ 1.19
CDCP1-202ENST00000425231 CLEC4CQ8WTT0 213 aa22.5■■□□□ 1.19
CDCP1-202ENST00000425231 CDV3Q9UKY7 258 aaKnown RBP22.5■■□□□ 1.19
CDCP1-202ENST00000425231 A0A1W2PQF6 199 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 GDF9O60383 454 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 FOXD2O60548 495 aaPredicted RBP22.49■■□□□ 1.19
CDCP1-202ENST00000425231 BCKDHBP21953 392 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 GBP1P32455 592 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
CDCP1-202ENST00000425231 WASP42768 502 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 APBA1Q02410 837 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 DPCR1Q3MIW9 517 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 MSANTD2Q6P1R3 559 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 ENOSF1Q7L5Y1 443 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 CD248Q9HCU0 757 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 LAMA1P25391 3075 aa22.49■■□□□ 1.19
CDCP1-202ENST00000425231 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.48■■□□□ 1.19
CDCP1-202ENST00000425231 TCRBV21S2A2A0A5A6 115 aa22.48■■□□□ 1.19
CDCP1-202ENST00000425231 GTPBP10A4D1E9 387 aaKnown RBP22.48■■□□□ 1.19
CDCP1-202ENST00000425231 HOXB2P14652 356 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms