RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 C7orf25Q9BPX7 421 aa16.99■□□□□ 0.31
PUDP-203ENST00000424830 SDCBP2Q9H190 292 aa16.99■□□□□ 0.31
PUDP-203ENST00000424830 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
PUDP-203ENST00000424830 GAREM1Q9H706 876 aa16.99■□□□□ 0.31
PUDP-203ENST00000424830 ITM2CQ9NQX7 267 aa16.99■□□□□ 0.31
PUDP-203ENST00000424830 PLK2Q9NYY3 685 aa16.99■□□□□ 0.31
PUDP-203ENST00000424830 KIAA1522Q9P206 1035 aaPredicted RBP16.99■□□□□ 0.31
PUDP-203ENST00000424830 USP36Q9P275 1121 aaKnown RBP16.99■□□□□ 0.31
PUDP-203ENST00000424830 DNMT3LQ9UJW3 386 aa16.99■□□□□ 0.31
PUDP-203ENST00000424830 SLC27A6Q9Y2P4 619 aa16.99■□□□□ 0.31
PUDP-203ENST00000424830 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
PUDP-203ENST00000424830 BCAT2O15382 392 aaPredicted RBP16.98■□□□□ 0.31
PUDP-203ENST00000424830 RARGP13631 454 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 ADORA2BP29275 332 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 MATKP42679 507 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 NDST1P52848 882 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 ORC1Q13415 861 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 NFKBIBQ15653 356 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 C10orf120Q5SQS8 335 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 DCAF12L1Q5VU92 463 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 SLCO6A1Q86UG4 719 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 CRYBG2Q8N1P7 616 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 MDM1Q8TC05 714 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 PRCCQ92733 491 aaPredicted RBP16.98■□□□□ 0.31
PUDP-203ENST00000424830 JAKMIP2Q96AA8 810 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 MKRN2Q9H000 416 aaKnown RBP16.98■□□□□ 0.31
PUDP-203ENST00000424830 MAGEF1Q9HAY2 307 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 TM7SF3Q9NS93 570 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 OSER1Q9NX31 292 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 ZNF510Q9Y2H8 683 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 PCDHA5Q9Y5H7 936 aa16.98■□□□□ 0.31
PUDP-203ENST00000424830 SPTLC2O15270 562 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 CILPO75339 1184 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 C4BPAP04003 597 aaKnown RBP16.97■□□□□ 0.31
PUDP-203ENST00000424830 ACADMP11310 421 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 ACO1P21399 889 aaKnown RBP16.97■□□□□ 0.31
PUDP-203ENST00000424830 CHKAP35790 457 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 IL12RB1P42701 662 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 PSEN1P49768 467 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 TPMTP51580 245 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 CLDN10P78369 228 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 EHHADHQ08426 723 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
PUDP-203ENST00000424830 SGSM1Q2NKQ1 1148 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 SOWAHCQ53LP3 525 aaPredicted RBP16.97■□□□□ 0.31
PUDP-203ENST00000424830 Q6ZNB5 142 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 GPRIN1Q7Z2K8 1008 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 TMPRSS6Q8IU80 811 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 C12orf29Q8N999 325 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 LINC00301Q8NCQ3 95 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 PLEKHO2Q8TD55 490 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 PARD3BQ8TEW8 1205 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 ELMO3Q96BJ8 720 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 SIPA1Q96FS4 1042 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 CDC6Q99741 560 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 SLC39A2Q9NP94 309 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.97■□□□□ 0.31
PUDP-203ENST00000424830 THAP10Q9P2Z0 257 aaPredicted RBP16.97■□□□□ 0.31
PUDP-203ENST00000424830 HMGXB4Q9UGU5 601 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 NAGPAQ9UK23 515 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 FBXO10Q9UK96 956 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 NUDT5Q9UKK9 219 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 RAXQ9Y2V3 346 aa16.97■□□□□ 0.31
PUDP-203ENST00000424830 A0A1W2PQH9 124 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 METTL12A8MUP2 240 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 MDM4O15151 490 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 FLRT2O43155 660 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 STX6O43752 255 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 VNN1O95497 513 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 PENKP01210 267 aaPredicted RBP16.96■□□□□ 0.31
PUDP-203ENST00000424830 RPN1P04843 607 aaKnown RBP16.96■□□□□ 0.31
PUDP-203ENST00000424830 MFAP3P55082 362 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 HLA-BQ31612 363 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 CLEC20AQ6ZU45 233 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 TMPRSS7Q7RTY8 843 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 HNRNPLLQ8WVV9 542 aaKnown RBP16.96■□□□□ 0.31
PUDP-203ENST00000424830 TAF4BQ92750 862 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 CDK5RAP1Q96SZ6 601 aaKnown RBP16.96■□□□□ 0.31
PUDP-203ENST00000424830 NUP58Q9BVL2 599 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 NMUR1Q9HB89 426 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 IL21RQ9HBE5 538 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 PNPLA8Q9NP80 782 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 FNDC3AQ9Y2H6 1198 aaKnown RBP16.96■□□□□ 0.31
PUDP-203ENST00000424830 PCDHGB2Q9Y5G2 931 aa16.96■□□□□ 0.31
PUDP-203ENST00000424830 SETXQ7Z333 2677 aaKnown RBP16.96■□□□□ 0.3
PUDP-203ENST00000424830 EIF4E1BA6NMX2 242 aaKnown RBP16.96■□□□□ 0.3
PUDP-203ENST00000424830 KCNJ18B7U540 433 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 PPP6R2O75170 966 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 STC2O76061 302 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 RALAP11233 206 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 ENPP2Q13822 863 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 SUZ12Q15022 739 aaKnown RBP16.96■□□□□ 0.3
PUDP-203ENST00000424830 EIF4HQ15056 248 aaKnown RBP16.96■□□□□ 0.3
PUDP-203ENST00000424830 GEN1Q17RS7 908 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 FYB2Q5VWT5 728 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 ANKS1BQ7Z6G8 1248 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 BAHD1Q8TBE0 780 aaPredicted RBP16.96■□□□□ 0.3
PUDP-203ENST00000424830 HNRNPABQ99729 332 aaKnown RBP16.96■□□□□ 0.3
PUDP-203ENST00000424830 DNAI2Q9GZS0 605 aa16.96■□□□□ 0.3
PUDP-203ENST00000424830 BLZF1Q9H2G9 400 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms