RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ZNF33AQ06730 810 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 KRT39Q6A163 491 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 UNQ6494/PRO21346Q6UXR6 183 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 Q6ZNB5 142 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 KRBA2Q6ZNG9 492 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 RSRC2Q7L4I2 434 aaKnown RBP16.97■□□□□ 0.31
COL18A1-205ENST00000423214 TTC39CQ8N584 583 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 HEXIM2Q96MH2 286 aaKnown RBP16.97■□□□□ 0.31
COL18A1-205ENST00000423214 HSPA12BQ96MM6 686 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 ACOX2Q99424 681 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 GABRG3Q99928 467 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 DCLK3Q9C098 648 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 CLIC5Q9NZA1 410 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 HCN2Q9UL51 889 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 ATP6V1DQ9Y5K8 247 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 RAD54BQ9Y620 910 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 CFAP47Q6ZTR5 3102 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 GFRA2O00451 464 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 STX10O60499 249 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 NDUFS2O75306 463 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 HMBSP08397 361 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 EPB41P11171 864 aaKnown RBP16.96■□□□□ 0.31
COL18A1-205ENST00000423214 CORO1AP31146 461 aaKnown RBP16.96■□□□□ 0.31
COL18A1-205ENST00000423214 GTF2H1P32780 548 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 CHKAP35790 457 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 SLC8A3P57103 927 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 COG7P83436 770 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 EFEMP1Q12805 493 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 BECN1Q14457 450 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 STARD3Q14849 445 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 KIAA1211LQ6NV74 962 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 SCD5Q86SK9 330 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 ARHGAP18Q8N392 663 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 FBXL13Q8NEE6 735 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 UCMAQ8WVF2 138 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 ADAM33Q9BZ11 813 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 SCAND2PQ9GZW5 306 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-205ENST00000423214 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 STRIP2Q9ULQ0 834 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 SLC6A14Q9UN76 642 aa16.96■□□□□ 0.31
COL18A1-205ENST00000423214 MUC22E2RYF6 1773 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-205ENST00000423214 FAM237AA0A1B0GTK4 181 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 CYBBP04839 570 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 PROS1P07225 676 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 SERPINF2P08697 491 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 EDRF1Q3B7T1 1238 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 TCERG1LQ5VWI1 586 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 RGL4Q8IZJ4 473 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 FAXDC2Q96IV6 333 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 FSCN3Q9NQT6 498 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 CISHQ9NSE2 258 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 FAM208BQ5VWN6 2430 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 TMEM131Q92545 1883 aa16.95■□□□□ 0.3
COL18A1-205ENST00000423214 CHD6Q8TD26 2715 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 C1QTNF9BB2RNN3 333 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 OPHN1O60890 802 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 PENKP01210 267 aaPredicted RBP16.94■□□□□ 0.3
COL18A1-205ENST00000423214 C1QTNF9P0C862 333 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 SPINK2P20155 84 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 ZCWPW2Q504Y3 356 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 DCAF17Q5H9S7 520 aaPredicted RBP16.94■□□□□ 0.3
COL18A1-205ENST00000423214 SYCP2LQ5T4T6 812 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 ANKS1BQ7Z6G8 1248 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 SLC41A1Q8IVJ1 513 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 ZNF276Q8N554 614 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 MINDY1Q8N5J2 469 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 TRIML1Q8N9V2 468 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 EEF2KMTQ96G04 330 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 TMEM176AQ96HP8 235 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 MRGPRX1Q96LB2 322 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 SLC6A17Q9H1V8 727 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 GOLPH3LQ9H4A5 285 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 CD248Q9HCU0 757 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 RAB20Q9NX57 234 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 SUSD2Q9UGT4 822 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 USP3Q9Y6I4 520 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 STON1Q9Y6Q2 735 aa16.94■□□□□ 0.3
COL18A1-205ENST00000423214 A0A1W2PQ27 194 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 A0A1W2PQ64 194 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 A0A1W2PQD8 194 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 MEI4A8MW99 385 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 NPC1O15118 1278 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 CETN3O15182 167 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 SYPP08247 313 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 CISD3P0C7P0 127 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 MFAP3P55082 362 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 YWHAGP61981 247 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL18A1-205ENST00000423214 E2F5Q15329 346 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 PIGZQ86VD9 579 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 SMYD4Q8IYR2 804 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-205ENST00000423214 SLC4A11Q8NBS3 891 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 FOXJ1Q92949 421 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 TSG101Q99816 390 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 ARID3AQ99856 593 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 SCNM1Q9BWG6 230 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 FAM124BQ9H5Z6 455 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-205ENST00000423214 CAPN10Q9HC96 672 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 CD93Q9NPY3 652 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 MARCH2Q9P0N8 246 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms