RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 RRAGDQ9NQL2 400 aaPredicted RBP22.42■■□□□ 1.18
ABCF3-202ENST00000421340 PIGVQ9NUD9 493 aa22.42■■□□□ 1.18
ABCF3-202ENST00000421340 DNMT3BQ9UBC3 853 aaKnown RBP22.42■■□□□ 1.18
ABCF3-202ENST00000421340 RNF14Q9UBS8 474 aa22.42■■□□□ 1.18
ABCF3-202ENST00000421340 PCSK1NQ9UHG2 260 aa22.42■■□□□ 1.18
ABCF3-202ENST00000421340 DNMT3LQ9UJW3 386 aa22.42■■□□□ 1.18
ABCF3-202ENST00000421340 TLR6Q9Y2C9 796 aa22.42■■□□□ 1.18
ABCF3-202ENST00000421340 GREB1Q4ZG55 1949 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 KCNK3O14649 394 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 ZRANB2O95218 330 aaKnown RBP eCLIP22.41■■□□□ 1.18
ABCF3-202ENST00000421340 OAS1P00973 400 aaKnown RBP22.41■■□□□ 1.18
ABCF3-202ENST00000421340 TCF4P15884 667 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 DDX6P26196 483 aaKnown RBP eCLIP22.41■■□□□ 1.18
ABCF3-202ENST00000421340 GABRR2P28476 465 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 NME3Q13232 169 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 PPP2R5DQ14738 602 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 TRIP4Q15650 581 aaPredicted RBP22.41■■□□□ 1.18
ABCF3-202ENST00000421340 ARL13BQ3SXY8 428 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 RAB6CQ53S08 254 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 TCEAL5Q5H9L2 206 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 SCYL2Q6P3W7 929 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 CYP4V2Q6ZWL3 525 aaPredicted RBP22.41■■□□□ 1.18
ABCF3-202ENST00000421340 GAREM2Q75VX8 874 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 HS6ST3Q8IZP7 471 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 VN1R2Q8NFZ6 395 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 MRPS31Q92665 395 aaKnown RBP22.41■■□□□ 1.18
ABCF3-202ENST00000421340 GCNAQ96QF7 691 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 RAB6CQ9H0N0 254 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 PRDM12Q9H4Q4 367 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 CCSER2Q9H7U1 834 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.41■■□□□ 1.18
ABCF3-202ENST00000421340 MARCH2Q9P0N8 246 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 ZMYM5Q9UJ78 669 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 CDC23Q9UJX2 597 aa22.41■■□□□ 1.18
ABCF3-202ENST00000421340 HBS1LQ9Y450 684 aaKnown RBP22.41■■□□□ 1.18
ABCF3-202ENST00000421340 ZNF197O14709 1029 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 URI1O94763 535 aaPredicted RBP22.4■■□□□ 1.18
ABCF3-202ENST00000421340 RARAP10276 462 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 CCR1P32246 355 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 ADRA1BP35368 520 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 MARCKSL1P49006 195 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 COPS2P61201 443 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 RING1Q06587 406 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 SCAPQ12770 1279 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 EFEMP1Q12805 493 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 ADAM15Q13444 863 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 GRIN2CQ14957 1233 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 CLUL1Q15846 466 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 VSIG1Q86XK7 387 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 ADAM32Q8TC27 787 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 FAM71BQ8TC56 605 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 SLC39A13Q96H72 371 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 RBM41Q96IZ5 413 aaKnown RBP22.4■■□□□ 1.18
ABCF3-202ENST00000421340 PEBP4Q96S96 227 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 WDCPQ9H6R7 721 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 ARHGEF38Q9NXL2 777 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 SFMBT1Q9UHJ3 866 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 TTC7AQ9ULT0 858 aaPredicted RBP22.4■■□□□ 1.18
ABCF3-202ENST00000421340 MTCH2Q9Y6C9 303 aa22.4■■□□□ 1.18
ABCF3-202ENST00000421340 MTCL1Q9Y4B5 1905 aaKnown RBP22.39■■□□□ 1.18
ABCF3-202ENST00000421340 CLUHO75153 1309 aa22.39■■□□□ 1.18
ABCF3-202ENST00000421340 SPDYE4A6NLX3 237 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 OLFM2O95897 454 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 TBX18O95935 607 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 RHOP08100 348 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 HOXB8P17481 243 aaPredicted RBP22.39■■□□□ 1.17
ABCF3-202ENST00000421340 CETN2P41208 172 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 ATXN1P54253 815 aaKnown RBP22.39■■□□□ 1.17
ABCF3-202ENST00000421340 COG7P83436 770 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 PDK2Q15119 407 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 ACBD5Q5T8D3 534 aaPredicted RBP22.39■■□□□ 1.17
ABCF3-202ENST00000421340 ZNF697Q5TEC3 545 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 TXNRD3NBQ6F5E7 133 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 PDZD4Q76G19 769 aaPredicted RBP22.39■■□□□ 1.17
ABCF3-202ENST00000421340 FAM131BQ86XD5 332 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 RASGEF1CQ8N431 466 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 IGFLR1Q9H665 355 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 ZWILCHQ9H900 591 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 NUDT5Q9UKK9 219 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 FZD10Q9ULW2 581 aa22.39■■□□□ 1.17
ABCF3-202ENST00000421340 KCNU1A8MYU2 1149 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 ZNF487B1APH4 448 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 COCHO43405 550 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 IGLV3-27P01718 113 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 PYGMP11217 842 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 MYL4P12829 197 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 GTF2F1P35269 517 aaKnown RBP eCLIP22.38■■□□□ 1.17
ABCF3-202ENST00000421340 ARSEP51690 589 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 ZNF135P52742 658 aaPredicted RBP22.38■■□□□ 1.17
ABCF3-202ENST00000421340 TBX4P57082 545 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 ATP13A4Q4VNC1 1196 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 DCAF12L1Q5VU92 463 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 GPR153Q6NV75 609 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 MAP7D3Q8IWC1 876 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 HAPLN3Q96S86 360 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 ATXN3LQ9H3M9 355 aa22.38■■□□□ 1.17
ABCF3-202ENST00000421340 RANBP2P49792 3224 aaKnown RBP22.37■■□□□ 1.17
ABCF3-202ENST00000421340 SYNJ2BP-COX16A0A087WUM0 186 aa22.37■■□□□ 1.17
ABCF3-202ENST00000421340 KDELR1P24390 212 aa22.37■■□□□ 1.17
ABCF3-202ENST00000421340 PTPN7P35236 360 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms