RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 GPRC5CQ9NQ84 441 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 NDUFAF1Q9Y375 327 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 GSTM1P09488 218 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 PDK3Q15120 406 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 HIST2H2ACQ16777 129 aaPredicted RBP12.69□□□□□ -0.38
CLCN4-203ENST00000421085 DALRD3Q5D0E6 543 aaKnown RBP12.69□□□□□ -0.38
CLCN4-203ENST00000421085 HIST2H2AA3Q6FI13 130 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 UXS1Q8NBZ7 420 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 GORASP1Q9BQQ3 440 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 KCND1Q9NSA2 647 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 DUSP12Q9UNI6 340 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 KLHL20Q9Y2M5 609 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 PNMA8CA0A1B0GUJ8 204 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 MRASO14807 208 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 ENTPD5O75356 428 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 VPS26AO75436 327 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 ALADP13716 330 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 MAPK1P28482 360 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 FAAP100Q0VG06 881 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 AMHR2Q16671 573 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 NET1Q7Z628 596 aaPredicted RBP12.68□□□□□ -0.38
CLCN4-203ENST00000421085 COLGALT1Q8NBJ5 622 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 TBC1D10AQ9BXI6 508 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 PTPRHQ9HD43 1115 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 A0A0U1RQJ8 604 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 KRT6BP04259 564 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 CAPZA2P47755 286 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 KRT6CP48668 564 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 ELMSAN1Q6PJG2 1045 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 MARK2Q7KZI7 788 aaKnown RBP12.68□□□□□ -0.38
CLCN4-203ENST00000421085 FAM228AQ86W67 206 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 SLC22A9Q8IVM8 553 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 EMC1Q8N766 993 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 CORO1CQ9ULV4 474 aaPredicted RBP12.68□□□□□ -0.38
CLCN4-203ENST00000421085 TPRKBQ9Y3C4 175 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 RAD54BQ9Y620 910 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 COMMD3-BMI1R4GMX3 469 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 A2ML1A8K2U0 1454 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 ASB14A6NK59 587 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 C2orf81A6NN90 581 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 KRT36O76013 467 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 SLC45A4Q5BKX6 768 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 ERMARDQ5T6L9 678 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 CD302Q8IX05 232 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 TRPC4APQ8TEL6 797 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 CINPQ9BW66 212 aaPredicted RBP12.68□□□□□ -0.38
CLCN4-203ENST00000421085 ALOX15P16050 662 aaPredicted RBP12.68□□□□□ -0.38
CLCN4-203ENST00000421085 NR1D2Q14995 579 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 RNF43Q68DV7 783 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 EFCAB12Q6NXP0 572 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 KIAA0895Q8NCT3 520 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 POLE3Q9NRF9 147 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 MRPL39Q9NYK5 338 aaKnown RBP12.68□□□□□ -0.38
CLCN4-203ENST00000421085 GGA2Q9UJY4 613 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 VANGL2Q9ULK5 521 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 CENPXA8MT69 81 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 ADCY6O43306 1168 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
CLCN4-203ENST00000421085 MUTP22033 750 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 SLFN11Q7Z7L1 901 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 EXOC3L1Q86VI1 746 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 OR6J1Q8NGC5 347 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 PLEKHG4BQ96PX9 1271 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 RIBC2Q9H4K1 309 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 KCNK4Q9NYG8 393 aa12.68□□□□□ -0.38
CLCN4-203ENST00000421085 WDR27A2RRH5 827 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 CSF1RP07333 972 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 HK2P52789 917 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 TTLL9Q3SXZ7 439 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 GRTP1Q5TC63 336 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 TAS1R2Q8TE23 839 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 FAM210AQ96ND0 272 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 APOL4Q9BPW4 351 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 SPATA16Q9BXB7 569 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 CCDC167Q9P0B6 97 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 PCDHA3Q9Y5H8 950 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 AK9Q5TCS8 1911 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 ZC3H11AO75152 810 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 PDE9AO76083 593 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 GCLCP48506 637 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 CYP4Z1Q86W10 505 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 TSPAN14Q8NG11 270 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 FNIP1Q8TF40 1166 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 FICDQ9BVA6 458 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 ZNF518BQ9C0D4 1074 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 AVENQ9NQS1 362 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 PDE2AO00408 941 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 EPB42P16452 691 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 TNFRSF8P28908 595 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 PKN1Q16512 942 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 NT5DC1Q5TFE4 455 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 TTC27Q6P3X3 843 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 DPP3Q9NY33 737 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 FLT3P36888 993 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 RBM44Q6ZP01 1051 aaKnown RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 ARHGEF19Q8IW93 802 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms