RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 TADA2BQ86TJ2 420 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 TAC4Q86UU9 113 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 SYCE1Q8N0S2 351 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 ARL14EPQ8N8R7 260 aaPredicted RBP13.02□□□□□ -0.33
TMEM53-206ENST00000420706 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 ITFG1Q8TB96 612 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 ADAM32Q8TC27 787 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 FAM172AQ8WUF8 416 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 CYP2S1Q96SQ9 504 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 SMOC2Q9H3U7 446 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 TASP1Q9H6P5 420 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 TRPC7Q9HCX4 862 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 WDR6Q9NNW5 1121 aaKnown RBP13.02□□□□□ -0.33
TMEM53-206ENST00000420706 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 RASAL2Q9UJF2 1139 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 DNMT3LQ9UJW3 386 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 USTQ9Y2C2 406 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 MRPS23Q9Y3D9 190 aaKnown RBP13.02□□□□□ -0.33
TMEM53-206ENST00000420706 HYOU1Q9Y4L1 999 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 CHD7Q9P2D1 2997 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 SYNJ2BP-COX16A0A087WUM0 186 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 IRAK2O43187 625 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 LRCH4O75427 683 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 DESP17661 470 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 HDCP19113 662 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 PCK1P35558 622 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 HDAC4P56524 1084 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 NME3Q13232 169 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 ARHGAP15Q53QZ3 475 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 STXBP5Q5T5C0 1151 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 GPR158Q5T848 1215 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 DAB2IPQ5VWQ8 1189 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 CES5AQ6NT32 575 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 NT5DC3Q86UY8 548 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 SLC35F6Q8N357 371 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 TRIM58Q8NG06 486 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.01□□□□□ -0.33
TMEM53-206ENST00000420706 PPM1EQ8WY54 764 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 SERPINB11Q96P15 392 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 ALS2CR12Q96Q35 445 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 SLC22A12Q96S37 553 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 NCAPGQ9BPX3 1015 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 KLF16Q9BXK1 252 aaPredicted RBP13.01□□□□□ -0.33
TMEM53-206ENST00000420706 FAM204AQ9H8W3 233 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 DDIT4Q9NX09 232 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM53-206ENST00000420706 MARCH2Q9P0N8 246 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 COX16Q9P0S2 106 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 AMFRQ9UKV5 643 aa13.01□□□□□ -0.33
TMEM53-206ENST00000420706 LAMA2P24043 3122 aaKnown RBP13.01□□□□□ -0.33
TMEM53-206ENST00000420706 TRAV19A0A0A6YYK7 116 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 SLC12A8A0AV02 714 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 MSI1O43347 362 aaKnown RBP13□□□□□ -0.33
TMEM53-206ENST00000420706 MBL2P11226 248 aaPredicted RBP13□□□□□ -0.33
TMEM53-206ENST00000420706 TCF4P15884 667 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 CEBPBP17676 345 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 FSHRP23945 695 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 MIPP30301 263 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 RDXP35241 583 aaKnown RBP13□□□□□ -0.33
TMEM53-206ENST00000420706 CXCR3P49682 368 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 TBX4P57082 545 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 TAS2R40P59535 323 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 GNG11P61952 73 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 SLC7A9P82251 487 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 NNTQ13423 1086 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 TRIP4Q15650 581 aaPredicted RBP13□□□□□ -0.33
TMEM53-206ENST00000420706 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 NYAP1Q6ZVC0 841 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 MIB1Q86YT6 1006 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 SLC39A13Q96H72 371 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 RIPOR3Q96MK2 946 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 NACA2Q9H009 215 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 GKN1Q9NS71 199 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 PIGVQ9NUD9 493 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 TMEM51Q9NW97 253 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 PCSK1NQ9UHG2 260 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 CD207Q9UJ71 328 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 ZMYM5Q9UJ78 669 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 USP18Q9UMW8 372 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 TLR6Q9Y2C9 796 aa13□□□□□ -0.33
TMEM53-206ENST00000420706 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
TMEM53-206ENST00000420706 CLUHO75153 1309 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 SPOPO43791 374 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 FTCDO95954 541 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 IL1R2P27930 398 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 MTHFRP42898 656 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 KPNA1P52294 538 aaPredicted RBP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 COG7P83436 770 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 SLC25A11Q02978 314 aaKnown RBP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 CBX2Q14781 532 aaPredicted RBP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 CLUL1Q15846 466 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 HADHQ16836 314 aaKnown RBP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 ZC3H12AQ5D1E8 599 aaKnown RBP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 MEI1Q5TIA1 1274 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 SND1Q7KZF4 910 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 FAM131BQ86XD5 332 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 CMTM8Q8IZV2 173 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms