RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 XPOTO43592 962 aaKnown RBP9.13□□□□□ -0.95
SNCA-206ENST00000420646 BDNFP23560 247 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 MATKP42679 507 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 WDR4P57081 412 aaKnown RBP9.13□□□□□ -0.95
SNCA-206ENST00000420646 MRPS5P82675 430 aaKnown RBP9.13□□□□□ -0.95
SNCA-206ENST00000420646 TFDP2Q14188 446 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 STAT4Q14765 748 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 NUGGCQ68CJ6 796 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 LIMS2Q7Z4I7 341 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 LRRTM3Q86VH5 581 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 UNC5BQ8IZJ1 945 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 DEPDC1BQ8WUY9 529 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 SYT15Q9BQS2 421 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 CCDC77Q9BR77 488 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 DTLQ9NZJ0 730 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 IL1RAPL1Q9NZN1 696 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 TLL2Q9Y6L7 1015 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 A6NNZ2 444 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 DPYSL4O14531 572 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 GABRDO14764 452 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 XPO1O14980 1071 aaKnown RBP9.13□□□□□ -0.95
SNCA-206ENST00000420646 UGT1A9O60656 530 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 SETSIPP0DME0 302 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 NCAM1P13591 858 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 KRT4P19013 534 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 WARSP23381 471 aaKnown RBP9.13□□□□□ -0.95
SNCA-206ENST00000420646 LRPAP1P30533 357 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 FOXN2P32314 431 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 YWHAGP61981 247 aaKnown RBP eCLIP9.13□□□□□ -0.95
SNCA-206ENST00000420646 LPIN1Q14693 890 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.95
SNCA-206ENST00000420646 UPP1Q16831 310 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 TUBB8Q3ZCM7 444 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 SLC9A4Q6AI14 798 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 PDIK1LQ8N165 341 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 STK32AQ8WU08 396 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 CENPIQ92674 756 aaPredicted RBP9.13□□□□□ -0.95
SNCA-206ENST00000420646 RTP3Q9BQQ7 232 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 UGT1A7Q9HAW7 530 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 UGT1A10Q9HAW8 530 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 UGT1A8Q9HAW9 530 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 SPC25Q9HBM1 224 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 KCNK1O00180 336 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 CAPN9O14815 690 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 MFSD11O43934 449 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 TRPA1O75762 1119 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 FAM200BP0CF97 657 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 VAV1P15498 845 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 INHBEP58166 350 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 SREBF2Q12772 1141 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 PDK2Q15119 407 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 DPYSL2Q16555 572 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 KBTBD12Q3ZCT8 623 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 NCBP2-AS2Q69YL0 99 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 DENND5BQ6ZUT9 1274 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 TRABD2AQ86V40 505 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 RELL1Q8IUW5 271 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 MICALL1Q8N3F8 863 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 OTUD6BQ8N6M0 293 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 TOP6BLQ8N6T0 577 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 CCNYQ8ND76 341 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 TRABDQ9H4I3 376 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 SLCO1B3Q9NPD5 702 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 SLC17A6Q9P2U8 582 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 TCRBV9S1A1TA0A576 114 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 CXorf49A8MYA2 514 aaPredicted RBP9.12□□□□□ -0.95
SNCA-206ENST00000420646 MDM4O15151 490 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 STIP1P31948 543 aaKnown RBP9.12□□□□□ -0.95
SNCA-206ENST00000420646 STX2P32856 288 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 PTPN9P43378 593 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 TM4SF4P48230 202 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 MGAT3Q09327 533 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 AP1B1Q10567 949 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 SPARCL1Q14515 664 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 KCNJ11Q14654 390 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 SLC1A5Q15758 541 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 GKAP1Q5VSY0 366 aaPredicted RBP9.12□□□□□ -0.95
SNCA-206ENST00000420646 SDHAF4Q5VUM1 108 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 RSPH3Q86UC2 560 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 FAM35AQ86V20 835 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 CAND1Q86VP6 1230 aaKnown RBP9.12□□□□□ -0.95
SNCA-206ENST00000420646 ZNF280BQ86YH2 543 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 CACNA2D3Q8IZS8 1091 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 OR10T2Q8NGX3 314 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 HSFY1Q96LI6 401 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 PAFAH2Q99487 392 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 STMN4Q9H169 189 aaPredicted RBP9.12□□□□□ -0.95
SNCA-206ENST00000420646 ARHGEF4Q9NR80 690 aa9.12□□□□□ -0.95
SNCA-206ENST00000420646 ZNF638Q14966 1978 aaKnown RBP9.12□□□□□ -0.95
SNCA-206ENST00000420646 KIAA0100Q14667 2235 aaKnown RBP9.12□□□□□ -0.95
SNCA-206ENST00000420646 DNM1LO00429 736 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 SLC8A3P57103 927 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 DNAJC3Q13217 504 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 ITGA7Q13683 1181 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 TRMT10BQ6PF06 316 aaKnown RBP9.11□□□□□ -0.95
SNCA-206ENST00000420646 C6orf89Q6UWU4 347 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 TADA2BQ86TJ2 420 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 B3GALT6Q96L58 329 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 PLAC1Q9HBJ0 212 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms