RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ADIGQ0VDE8 80 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 KYNUQ16719 465 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 SGO1Q5FBB7 561 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 RARS2Q5T160 578 aaKnown RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 CXCL17Q6UXB2 119 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 BTNL9Q6UXG8 535 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 SETD3Q86TU7 594 aaPredicted RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 MMGT1Q8N4V1 131 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 ZNF296Q8WUU4 475 aaPredicted RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 TSEN34Q9BSV6 310 aaKnown RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 TMEM161AQ9NX61 479 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 EIF3LQ9Y262 564 aaKnown RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 ROBO3Q96MS0 1386 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 CFAP73A6NFT4 308 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 EVPLLA8MZ36 301 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 IFRD1O00458 451 aaPredicted RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 ENDOD1O94919 500 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 EPB42P16452 691 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 ACAT1P24752 427 aaKnown RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 SERPINB8P50452 374 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 ZNF135P52742 658 aaPredicted RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 YWHAZP63104 245 aaKnown RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 OTUD4Q01804 1114 aaKnown RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 TGM3Q08188 693 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 DNAL1Q4LDG9 190 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 MARC1Q5VT66 337 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 CCNI2Q6ZMN8 369 aaPredicted RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 ZNF438Q7Z4V0 828 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 SLC47A2Q86VL8 602 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 CMTM5Q96DZ9 223 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 ZNF556Q9HAH1 456 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 WARS2Q9UGM6 360 aaKnown RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 WNK3Q9BYP7 1800 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 A0A087X0T9 212 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 RBAK-RBAKDNI3L0D1 243 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 FAM228BP0C875 321 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 RRM1P23921 792 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 NCKAP1LP55160 1127 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 ITGA9Q13797 1035 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 MROH9Q5TGP6 573 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 CACHD1Q5VU97 1274 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 PLPPR4Q7Z2D5 763 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 C11orf96Q7Z7L8 435 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 FAM9CQ8IZT9 166 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 FAR2Q96K12 515 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 RBBP8Q99708 897 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 ZCCHC2Q9C0B9 1178 aaKnown RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 SYTL2Q9HCH5 934 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 DCDC2Q9UHG0 476 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 AURKCQ9UQB9 309 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 H0Y3Z8 333 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 PIK3CDO00329 1044 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 GLP2RO95838 553 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 IGSF6O95976 241 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 SERPINF2P08697 491 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 CYP2A6P11509 494 aaPredicted RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 CHN1P15882 459 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 CYP2F1P24903 491 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 PLCL1Q15111 1095 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 CCDC157Q569K6 752 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 MFSD4BQ5TF39 518 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 FIBCD1Q8N539 461 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 PGLYRP2Q96PD5 576 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 ADAM33Q9BZ11 813 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 MFSD1Q9H3U5 465 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 ATP13A1Q9HD20 1204 aa8.7□□□□□ -1.02
UBR4-206ENST00000419533 C6orf203Q9P0P8 240 aaPredicted RBP8.7□□□□□ -1.02
UBR4-206ENST00000419533 GLRA3O75311 464 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 MICAL2O94851 1124 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 JCHAINP01591 159 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 ERVK-10P10266 1014 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 PBLDP30039 288 aaPredicted RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 SCNN1BP51168 640 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 FAXCQ5TGI0 409 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 SH3BP5LQ7L8J4 393 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 PARP9Q8IXQ6 854 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 E2F7Q96AV8 911 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 VCPIP1Q96JH7 1222 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 CCDC90BQ9GZT6 254 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 KCTD10Q9H3F6 313 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 C11orf49Q9H6J7 331 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 MAN1C1Q9NR34 630 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 SPG21Q9NZD8 308 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 MTO1Q9Y2Z2 717 aaKnown RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 UBR2Q8IWV8 1755 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 MOXD2PA6NHM9 499 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 SEPT4O43236 478 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 RECQL4O94761 1208 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 OR1E1P30953 314 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 ATXN3P54252 364 aaPredicted RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 POLE2P56282 527 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 CNTN1Q12860 1018 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 NYAP1Q6ZVC0 841 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 NUP93Q8N1F7 819 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 ICA1LQ8NDH6 482 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 EDEM1Q92611 657 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 OTULINQ96BN8 352 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 C17orf80Q9BSJ5 609 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 C1QTNF7Q9BXJ2 289 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 CELF4Q9BZC1 486 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms