RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 KLHL33A6NCF5 533 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 GRM6O15303 877 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 DIAPH2O60879 1101 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 SOAT2O75908 522 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 FTLP02792 175 aaPredicted RBP13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CYP1A1P04798 512 aaPredicted RBP13.4□□□□□ -0.26
LINC00642-201ENST00000419459 URODP06132 367 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 RARGP13631 454 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CCNB1P14635 433 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 PAX3P23760 479 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 MSH2P43246 934 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 RGS7P49802 495 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 HADHBP55084 474 aaKnown RBP13.4□□□□□ -0.26
LINC00642-201ENST00000419459 KCNJ2P63252 427 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 DSG1Q02413 1049 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 SLC29A2Q14542 456 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CLEC16AQ2KHT3 1053 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 FAM171BQ6P995 826 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 LCLAT1Q6UWP7 414 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 ASRGL1Q7L266 308 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 TMC7Q7Z402 723 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 POF1BQ8WVV4 589 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 ARNTL2Q8WYA1 636 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 TCF25Q9BQ70 676 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CLSTN3Q9BQT9 956 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 C11orf70Q9BRQ4 267 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CRISPLD1Q9H336 500 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 PCYOX1Q9UHG3 505 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 PCDHGC3Q9UN70 934 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 ANKRD33BA6NCL7 494 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 A6NHS1 94 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 HIDE1A8MVS5 230 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 MIF4GDA9UHW6 222 aaKnown RBP13.4□□□□□ -0.26
LINC00642-201ENST00000419459 RASGRF2O14827 1237 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 MED7O43513 233 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 PHF2O75151 1096 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CYP2F1P24903 491 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 IRS1P35568 1242 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 GPD2P43304 727 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 MAP3K7CLP57077 242 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 ROR1Q01973 937 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 MLLT1Q03111 559 aaPredicted RBP13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CAMK1Q14012 370 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 PTPN20Q4JDL3 420 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CYP4A22Q5TCH4 519 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 PMF1Q6P1K2 205 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 RNF19BQ6ZMZ0 732 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 FAM35AQ86V20 835 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 EGFL6Q8IUX8 553 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 GRAMD1AQ96CP6 724 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CPXM1Q96SM3 734 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 ZCWPW1Q9H0M4 648 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 THAP2Q9H0W7 228 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 ZBP1Q9H171 429 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 LRRC4CQ9HCJ2 640 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 ENTPD7Q9NQZ7 604 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 MTRRQ9UBK8 725 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 CTNNAL1Q9UBT7 734 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 PLXNA3P51805 1871 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 TLDC2A0PJX2 215 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 AHCYL1O43865 530 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 TBC1D4O60343 1298 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 ATP5HO75947 161 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 VNN2O95498 520 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 NSFP46459 744 aaKnown RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 GALCP54803 685 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 PLTPP55058 493 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 IFI35P80217 286 aaPredicted RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 PLCB3Q01970 1234 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 PKDCCQ504Y2 493 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 ANKRD20A2Q5SQ80 823 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 ANKRD20A1Q5TYW2 823 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 SDHAF4Q5VUM1 108 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 ANKRD20A3Q5VUR7 823 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 PLPP4Q5VZY2 271 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 ARHGAP17Q68EM7 881 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 CLEC20AQ6ZU45 233 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 TRMT10CQ7L0Y3 403 aaKnown RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 CFAP61Q8NHU2 1237 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 FBXO25Q8TCJ0 367 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 SPPL3Q8TCT6 385 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 GPR152Q8TDT2 470 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 MICAL1Q8TDZ2 1067 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 CTNNBL1Q8WYA6 563 aaPredicted RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 TGS1Q96RS0 853 aaKnown RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 HNRNPABQ99729 332 aaKnown RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 TRIM31Q9BZY9 425 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 MRPL17Q9NRX2 175 aaKnown RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 GRHL1Q9NZI5 618 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 HESX1Q9UBX0 185 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 SLC27A5Q9Y2P5 690 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 RIPK2O43353 540 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 AP1G2O75843 785 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 FESP07332 822 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 FAM163BP0C2L3 166 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 SPATA31D3P0C874 917 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms