RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SYT13Q7L8C5 426 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 FMNL3Q8IVF7 1028 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 FAM71AQ8IYT1 594 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 NAT16Q8N8M0 369 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 ACDQ96AP0 544 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 NAA15Q9BXJ9 866 aaKnown RBP21.24■□□□□ 0.99
GTF3A-202ENST00000419181 MIS12Q9H081 205 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 EPC1Q9H2F5 836 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 POLR3BQ9NW08 1133 aaPredicted RBP21.24■□□□□ 0.99
GTF3A-202ENST00000419181 WDR35Q9P2L0 1181 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 DEC1Q9P2X7 70 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 AGO1Q9UL18 857 aaKnown RBP21.24■□□□□ 0.99
GTF3A-202ENST00000419181 PCDHGC3Q9UN70 934 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 HBS1LQ9Y450 684 aaKnown RBP21.24■□□□□ 0.99
GTF3A-202ENST00000419181 FHOD1Q9Y613 1164 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 ANTXRLA6NF34 631 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 TYRP14679 529 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 CLCN1P35523 988 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 FNTBP49356 437 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 SEC13P55735 322 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 PTK2Q05397 1052 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 TMEM110Q86TL2 294 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 LONP2Q86WA8 852 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 DENND1CQ8IV53 801 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 SCUBE3Q8IX30 993 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 GOLGA1Q92805 767 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 P2RY11Q96G91 374 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 LSM14BQ9BX40 385 aaKnown RBP21.23■□□□□ 0.99
GTF3A-202ENST00000419181 VPS16Q9H269 839 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 SFMBT1Q9UHJ3 866 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 SLC8A2Q9UPR5 921 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 FRYLO94915 3013 aa21.23■□□□□ 0.99
GTF3A-202ENST00000419181 E5RJQ4 531 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 SART1O43290 800 aaKnown RBP21.22■□□□□ 0.99
GTF3A-202ENST00000419181 UCHL3P15374 230 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 CHKAP35790 457 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 TNFRSF4P43489 277 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 MRPS21P82921 87 aaKnown RBP21.22■□□□□ 0.99
GTF3A-202ENST00000419181 PDCLQ13371 301 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 RAPGEF1Q13905 1077 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 DRAP1Q14919 205 aaPredicted RBP21.22■□□□□ 0.99
GTF3A-202ENST00000419181 NCAPHQ15003 741 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 PREPLQ4J6C6 727 aaPredicted RBP21.22■□□□□ 0.99
GTF3A-202ENST00000419181 C2orf27AQ580R0 203 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 HEATR6Q6AI08 1181 aaKnown RBP21.22■□□□□ 0.99
GTF3A-202ENST00000419181 SLC47A2Q86VL8 602 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 FAM217AQ8IXS0 508 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 WDTC1Q8N5D0 677 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 TERB1Q8NA31 727 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 HINFPQ9BQA5 517 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 PLCB1Q9NQ66 1216 aa21.22■□□□□ 0.99
GTF3A-202ENST00000419181 MYO18AQ92614 2054 aaKnown RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 CCDC163A0A0D9SF12 145 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 TRIM24O15164 1050 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 PAPSS1O43252 624 aaPredicted RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 MSI1O43347 362 aaKnown RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 PENKP01210 267 aaPredicted RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 FYNP06241 537 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 ZNF18P17022 549 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 KIR2DL1P43626 348 aaPredicted RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 DMC1Q14565 340 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 CAVIN1Q6NZI2 390 aaKnown RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 WDR5BQ86VZ2 330 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 CPXM2Q8N436 756 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 CAMKK1Q8N5S9 505 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 XPO6Q96QU8 1125 aaKnown RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 LHX5Q9H2C1 402 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 HSD3B7Q9H2F3 369 aa21.21■□□□□ 0.99
GTF3A-202ENST00000419181 DNAJC17Q9NVM6 304 aaKnown RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 LIMA1Q9UHB6 759 aaKnown RBP21.21■□□□□ 0.99
GTF3A-202ENST00000419181 CFAP54Q96N23 3096 aa21.2■□□□□ 0.99
GTF3A-202ENST00000419181 EML5Q05BV3 1969 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 TBC1D3BA6NDS4 549 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 IGLV3-27P01718 113 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 TPM2P07951 284 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 HARS2P49590 506 aaKnown RBP21.2■□□□□ 0.98
GTF3A-202ENST00000419181 COPB1P53618 953 aaKnown RBP21.2■□□□□ 0.98
GTF3A-202ENST00000419181 BPIFB4P59827 614 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 FYB2Q5VWT5 728 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 GRAMD4Q6IC98 578 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 BEND5Q7L4P6 421 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 PASD1Q8IV76 773 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 BHMTQ93088 406 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 FAM149B1Q96BN6 582 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 HHIPQ96QV1 700 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 CPXM1Q96SM3 734 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 GANQ9H2C0 597 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 PLK2Q9NYY3 685 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 TJP2Q9UDY2 1190 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 STOML2Q9UJZ1 356 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 MMP17Q9ULZ9 603 aa21.2■□□□□ 0.98
GTF3A-202ENST00000419181 SMG5Q9UPR3 1016 aaKnown RBP21.2■□□□□ 0.98
GTF3A-202ENST00000419181 F8VZ95 297 aa21.19■□□□□ 0.98
GTF3A-202ENST00000419181 HRO43593 1189 aa21.19■□□□□ 0.98
GTF3A-202ENST00000419181 LATS1O95835 1130 aa21.19■□□□□ 0.98
GTF3A-202ENST00000419181 NCAM1P13591 858 aa21.19■□□□□ 0.98
GTF3A-202ENST00000419181 CNR2P34972 360 aa21.19■□□□□ 0.98
GTF3A-202ENST00000419181 KRT9P35527 623 aa21.19■□□□□ 0.98
GTF3A-202ENST00000419181 PXNP49023 591 aaPredicted RBP21.19■□□□□ 0.98
GTF3A-202ENST00000419181 HSF5Q4G112 596 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms