RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 FAM187AA6NFU0 413 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 YJEFN3A6XGL0 299 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 E7ENQ6 273 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 M0QYT0 321 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 LCE2BO14633 110 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 IRAK2O43187 625 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 RAD51CO43502 376 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ZNF189O75820 626 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 FGF18O76093 207 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 EFEMP2O95967 443 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 F9P00740 461 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 APOEP02649 317 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ADH1AP07327 375 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 RARAP10276 462 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 HAPLN1P10915 354 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 TGM2P21980 687 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 YWHAQP27348 245 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 IL1R2P27930 398 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 TNFRSF8P28908 595 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ELF1P32519 619 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 OR1D2P34982 312 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 CDKN2BP42772 138 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ALDH1A3P47895 512 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 TUFMP49411 452 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 CDR1P51861 262 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 HDAC4P56524 1084 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 LMNB2Q03252 620 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 SCAPQ12770 1279 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 NME3Q13232 169 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 NNTQ13423 1086 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 CUL1Q13616 776 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 BRD3Q15059 726 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 PPP1R7Q15435 360 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 DPYSL2Q16555 572 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 CYP1B1Q16678 543 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 PPP6R3Q5H9R7 873 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 KCNT1Q5JUK3 1230 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 OTUD1Q5VV17 481 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 KAZNQ674X7 775 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 AADACL2Q6P093 401 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 MSANTD2Q6P1R3 559 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ELMSAN1Q6PJG2 1045 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 BLOC1S3Q6QNY0 202 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 MFSD7Q6UXD7 560 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 HFE2Q6ZVN8 426 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 SYDE1Q6ZW31 735 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 BBS12Q6ZW61 710 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ADAT2Q7Z6V5 191 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 TAC4Q86UU9 113 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 FAM131BQ86XD5 332 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 CCDC105Q8IYK2 499 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 VPS52Q8N1B4 723 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 TTC9BQ8N6N2 239 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ATAD1Q8NBU5 361 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 KCTD6Q8NC69 237 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 CCHCR1Q8TD31 782 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 DQX1Q8TE96 717 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 OVCA2Q8WZ82 227 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ANKRD7Q92527 254 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 TSC1Q92574 1164 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 CLP1Q92989 425 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 MAGOHBQ96A72 148 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 PGAP3Q96FM1 320 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 SAMD11Q96NU1 681 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 GCNAQ96QF7 691 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 NPY6RQ99463 290 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 RAD9AQ99638 391 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 C11orf84Q9BUA3 381 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 EMILIN2Q9BXX0 1053 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 MAK16Q9BXY0 300 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 DHX35Q9H5Z1 703 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ANKZF1Q9H8Y5 726 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 TLR8Q9NR97 1041 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ABCC13Q9NSE7 274 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 CXXC1Q9P0U4 656 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 GMIPQ9P107 970 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 UXTQ9UBK9 157 aaPredicted RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 MAFFQ9ULX9 164 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 LZTS1Q9Y250 596 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 EFR3BQ9Y2G0 817 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 UTP11Q9Y3A2 253 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 USP3Q9Y6I4 520 aa6.2□□□□□ -1.42
HMGB3-202ENST00000419110 MYO18AQ92614 2054 aaKnown RBP6.2□□□□□ -1.42
HMGB3-202ENST00000419110 ANKRD36A6QL64 1941 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 MYLKQ15746 1914 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 A0A1W2PQH9 124 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 APOC4-APOC2K7ER74 178 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 EEF2KO00418 725 aaKnown RBP6.19□□□□□ -1.42
HMGB3-202ENST00000419110 TNFRSF10BO14763 440 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 APOL1O14791 398 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 FSCN2O14926 492 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 TTI1O43156 1089 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 TBC1D4O60343 1298 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 APOC2P02655 101 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 LRG1P02750 347 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 CSH1P0DML2 217 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 CSH2P0DML3 217 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 CTSAP10619 480 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 SLC2A3P11169 496 aa6.19□□□□□ -1.42
HMGB3-202ENST00000419110 ATF2P15336 505 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms