RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 FZD5Q13467 585 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 ARID5BQ14865 1188 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 CLEC16AQ2KHT3 1053 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 SFMBT2Q5VUG0 894 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 SYPL2Q5VXT5 272 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 HGSNATQ68CP4 663 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 TOGARAM2Q6ZUX3 1019 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 PHF13Q86YI8 300 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-204ENST00000418628 VSTM4Q8IW00 320 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 CCDC105Q8IYK2 499 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 ADGRG2Q8IZP9 1017 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 CPA6Q8N4T0 437 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 CPA5Q8WXQ8 436 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 C18orf8Q96DM3 657 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 PDCL3Q9H2J4 239 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 DLGAP2Q9P1A6 1054 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 SFMBT1Q9UHJ3 866 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 STRIP2Q9ULQ0 834 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 NAALADL1Q9UQQ1 740 aa19.48■□□□□ 0.71
PTCD3-204ENST00000418628 MAN2B1O00754 1011 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 MSI1O43347 362 aaKnown RBP19.47■□□□□ 0.71
PTCD3-204ENST00000418628 NCAM1P13591 858 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 TARSP26639 723 aaKnown RBP19.47■□□□□ 0.71
PTCD3-204ENST00000418628 GJA4P35212 333 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 VCPP55072 806 aaKnown RBP19.47■□□□□ 0.71
PTCD3-204ENST00000418628 ZBED6P86452 979 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 RING1Q06587 406 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 ASIC2Q16515 512 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 EFHC1Q5JVL4 640 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 OTUD1Q5VV17 481 aaPredicted RBP19.47■□□□□ 0.71
PTCD3-204ENST00000418628 ASTLQ6HA08 431 aaPredicted RBP19.47■□□□□ 0.71
PTCD3-204ENST00000418628 MON1BQ7L1V2 547 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 ERICH1Q86X53 443 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 RNF139Q8WU17 664 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 GOLGA1Q92805 767 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 FAM149B1Q96BN6 582 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 SLC39A13Q96H72 371 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 FOXQ1Q9C009 403 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 NUCKS1Q9H1E3 243 aaKnown RBP19.47■□□□□ 0.71
PTCD3-204ENST00000418628 STOML2Q9UJZ1 356 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 CKAP5Q14008 2032 aa19.47■□□□□ 0.71
PTCD3-204ENST00000418628 SLC12A8A0AV02 714 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 GFRA2O00451 464 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 IRAK2O43187 625 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 HNRNPH3P31942 346 aaKnown RBP19.46■□□□□ 0.71
PTCD3-204ENST00000418628 PITX1P78337 314 aaPredicted RBP19.46■□□□□ 0.71
PTCD3-204ENST00000418628 DHCR24Q15392 516 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 SPECC1LQ69YQ0 1117 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 OR6B2Q6IFH4 312 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 RHBDF2Q6PJF5 856 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 ZNF852Q6ZMS4 543 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 ARCQ7LC44 396 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 ZNF571Q7Z3V5 609 aaPredicted RBP19.46■□□□□ 0.71
PTCD3-204ENST00000418628 TAC4Q86UU9 113 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 TMEM105Q8N8V8 129 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 CLDN23Q96B33 292 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 DCLK3Q9C098 648 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 MFSD1Q9H3U5 465 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 HAUS4Q9H6D7 363 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 MARK1Q9P0L2 795 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 LSM7Q9UK45 103 aaKnown RBP19.46■□□□□ 0.71
PTCD3-204ENST00000418628 MTF2Q9Y483 593 aaPredicted RBP19.46■□□□□ 0.71
PTCD3-204ENST00000418628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.46■□□□□ 0.713e-10■□□□□ 8.5
PTCD3-204ENST00000418628 WDFY4Q6ZS81 3184 aa19.46■□□□□ 0.71
PTCD3-204ENST00000418628 TCRBV5S1A1TA0A578 114 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 TRDMT1O14717 391 aaKnown RBP19.45■□□□□ 0.7
PTCD3-204ENST00000418628 HOXC11O43248 304 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-204ENST00000418628 LATS1O95835 1130 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 CD72P21854 359 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 CORO1AP31146 461 aaKnown RBP19.45■□□□□ 0.7
PTCD3-204ENST00000418628 OPRD1P41143 372 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 KPNA1P52294 538 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-204ENST00000418628 TRIM14Q14142 442 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 C2CD6Q53TS8 623 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 TRNP1Q6NT89 227 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 MMS22LQ6ZRQ5 1243 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 BNIPLQ7Z465 357 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 CPXM2Q8N436 756 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 MSANTD4Q8NCY6 345 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 TTC16Q8NEE8 873 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 TTC8Q8TAM2 541 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 FAM3CQ92520 227 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 NT5C3BQ969T7 300 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 P2RY11Q96G91 374 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 FCRL2Q96LA5 508 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-204ENST00000418628 SERPINB11Q96P15 392 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 ADAM33Q9BZ11 813 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 SYNCQ9H7C4 482 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 TMEM59LQ9UK28 342 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 ZNF510Q9Y2H8 683 aa19.45■□□□□ 0.7
PTCD3-204ENST00000418628 PI15O43692 258 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 CASP14P31944 242 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 CCINQ13939 588 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 TMEM196Q5HYL7 178 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 LY6G5CQ5SRR4 150 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 NAIF1Q69YI7 327 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-204ENST00000418628 ETFBKMTQ8IXQ9 262 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 DEFB106AQ8N104 65 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 FLCNQ8NFG4 579 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 SLC30A5Q8TAD4 765 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms