RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 GSPT2Q8IYD1 628 aaKnown RBP8.7□□□□□ -1.02
USP54-203ENST00000418501 RBM15Q96T37 977 aaKnown RBP eCLIP8.7□□□□□ -1.02
USP54-203ENST00000418501 ZBED2Q9BTP6 218 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 CHST7Q9NS84 486 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 DPP7Q9UHL4 492 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 FAM169AQ9Y6X4 670 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 ERI2A8K979 691 aaKnown RBP8.7□□□□□ -1.02
USP54-203ENST00000418501 CHADO15335 359 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 GJB6O95452 261 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 PPIGQ13427 754 aaKnown RBP eCLIP8.7□□□□□ -1.02
USP54-203ENST00000418501 LAMB3Q13751 1172 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 C1orf53Q5VUE5 145 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 TPGS2Q68CL5 300 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 FUT10Q6P4F1 479 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 FAM171BQ6P995 826 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 SLC2A13Q96QE2 648 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 CAPS2Q9BXY5 557 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 TRIM7Q9C029 511 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 IQCGQ9H095 443 aaKnown RBP8.7□□□□□ -1.02
USP54-203ENST00000418501 NRDE2Q9H7Z3 1164 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 PAK6Q9NQU5 681 aaPredicted RBP8.7□□□□□ -1.02
USP54-203ENST00000418501 RWDD3Q9Y3V2 267 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 CDH16O75309 829 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 KLF1Q13351 362 aaPredicted RBP8.7□□□□□ -1.02
USP54-203ENST00000418501 SLC45A4Q5BKX6 768 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 ZNF354CQ86Y25 554 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 FBXO25Q8TCJ0 367 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 ATG4AQ8WYN0 398 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 CENPIQ92674 756 aaPredicted RBP8.7□□□□□ -1.02
USP54-203ENST00000418501 TSNARE1Q96NA8 513 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 ZIM3Q96PE6 472 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 PPP1R12CQ9BZL4 782 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 ZCWPW1Q9H0M4 648 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 DNPEPQ9ULA0 475 aa8.7□□□□□ -1.02
USP54-203ENST00000418501 NR1D1P20393 614 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 CA8P35219 290 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 MRPS25P82663 173 aaKnown RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 DPYSL3Q14195 570 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 C15orf59Q2T9L4 293 aaPredicted RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 CCDC91Q7Z6B0 441 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 COLGALT2Q8IYK4 626 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 TBC1D31Q96DN5 1066 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 PGAP3Q96FM1 320 aaPredicted RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 TMEM109Q9BVC6 243 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 PRDM5Q9NQX1 630 aaPredicted RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 ZNF446Q9NWS9 450 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 KLHL8Q9P2G9 620 aaPredicted RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 IQANK1A0A1B0GTG1 560 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 MYBPHLA2RUH7 354 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 VGLL3A8MV65 326 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 TULP2O00295 520 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 MYCP01106 439 aaPredicted RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 USP17L7P0C7H9 530 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 CSH1P0DML2 217 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 CSH2P0DML3 217 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 ADRA1BP35368 520 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 MAGEA4P43358 317 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 DSC1Q08554 894 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 VARS2Q5ST30 1063 aaKnown RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 BSPRYQ5W0U4 402 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 DENND5BQ6ZUT9 1274 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 LINC00523Q86TU6 105 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 SLC35B2Q8TB61 432 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 OVCA2Q8WZ82 227 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 SEPT5Q99719 369 aaPredicted RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 CSNK1G1Q9HCP0 422 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 CRTAC1Q9NQ79 661 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 EXOC1LA0A1B0GW35 172 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 TTC4O95801 387 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 L1CAMP32004 1257 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 GARSP41250 739 aaKnown RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 MSH2P43246 934 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 CTCFP49711 727 aaPredicted RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 TLE2Q04725 743 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 ZNF33AQ06730 810 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 BTG3Q14201 252 aaPredicted RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 LLGL1Q15334 1064 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 PAN2Q504Q3 1202 aaKnown RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 NUGGCQ68CJ6 796 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 RWDD4Q6NW29 188 aaKnown RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 DEFB128Q7Z7B8 93 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 ZC3H18Q86VM9 953 aaKnown RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 FAM131BQ86XD5 332 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 DDX42Q86XP3 938 aaKnown RBP eCLIP8.69□□□□□ -1.02
USP54-203ENST00000418501 NPY6RQ99463 290 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 SELENOSQ9BQE4 189 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 TRPM5Q9NZQ8 1165 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 HSFX1Q9UBD0 423 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 IPO11Q9UI26 975 aaKnown RBP8.69□□□□□ -1.02
USP54-203ENST00000418501 CYTH4Q9UIA0 394 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 FZD10Q9ULW2 581 aa8.69□□□□□ -1.02
USP54-203ENST00000418501 KIAA0754O94854 1291 aa8.68□□□□□ -1.02
USP54-203ENST00000418501 ETFBP38117 255 aa8.68□□□□□ -1.02
USP54-203ENST00000418501 OGDHQ02218 1023 aa8.68□□□□□ -1.02
USP54-203ENST00000418501 PDIA2Q13087 525 aaKnown RBP8.68□□□□□ -1.02
USP54-203ENST00000418501 PPP2R5DQ14738 602 aa8.68□□□□□ -1.02
USP54-203ENST00000418501 B4GALNT4Q76KP1 1039 aa8.68□□□□□ -1.02
USP54-203ENST00000418501 GPR65Q8IYL9 337 aa8.68□□□□□ -1.02
USP54-203ENST00000418501 HASPINQ8TF76 798 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms