RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CWC15Q9P013 229 aaKnown RBP17.43■□□□□ 0.38
SSBP3-205ENST00000417664 CALCOCO1Q9P1Z2 691 aa17.43■□□□□ 0.38
SSBP3-205ENST00000417664 COL4A4P53420 1690 aaPredicted RBP17.43■□□□□ 0.38
SSBP3-205ENST00000417664 TRIM66O15016 1216 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 ADRA1BP35368 520 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 CHKAP35790 457 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 GRIK1P39086 918 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 MAGEA11P43364 429 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 HCAR3P49019 387 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 NME3Q13232 169 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 KRT71Q3SY84 523 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 VARS2Q5ST30 1063 aaKnown RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 BSPRYQ5W0U4 402 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 ZNF280DQ6N043 979 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 C1orf228Q6PIY5 440 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 NPNTQ6UXI9 565 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 UNC45BQ8IWX7 931 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 OR2W6PQ8NHA6 318 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 ZBTB9Q96C00 473 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 C8orf48Q96LL4 319 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 TTC25Q96NG3 672 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 RHOBTB2Q9BYZ6 727 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 WDR6Q9NNW5 1121 aaKnown RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 PIGVQ9NUD9 493 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 PAK5Q9P286 719 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 FBXW11Q9UKB1 542 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 FARP1Q9Y4F1 1045 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 NLRC5Q86WI3 1866 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 PATJQ8NI35 1801 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 HACD1B0YJ81 288 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 TNFRSF10BO14763 440 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 MYCP01106 439 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 ETS1P14921 441 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 FGFR3P22607 806 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 RPL22P35268 128 aaKnown RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 CTCFP49711 727 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 MNX1P50219 401 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 ATN1P54259 1190 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 GDF10P55107 478 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 SLC39A12Q504Y0 691 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 C6orf118Q5T5N4 469 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 ZC3H18Q86VM9 953 aaKnown RBP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 LRRC43Q8N309 656 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 ARFGAP2Q8N6H7 521 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 FAM71DQ8N9W8 422 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 RNF139Q8WU17 664 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 PGM2Q96G03 612 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 RBM15Q96T37 977 aaKnown RBP eCLIP17.42■□□□□ 0.38
SSBP3-205ENST00000417664 USP29Q9HBJ7 922 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 ABCC13Q9NSE7 274 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 PCDHB5Q9Y5E4 795 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 HEY1Q9Y5J3 304 aa17.42■□□□□ 0.38
SSBP3-205ENST00000417664 EIF3HO15372 352 aaKnown RBP eCLIP17.41■□□□□ 0.38
SSBP3-205ENST00000417664 RFC2P35250 354 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 CXCR3P49682 368 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 SLC5A3P53794 718 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 GYS2P54840 703 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 PITX1P78337 314 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-205ENST00000417664 TLE2Q04725 743 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 CTXN3Q4LDR2 81 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 FAM171A1Q5VUB5 890 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 CENPUQ71F23 418 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 PRUNE1Q86TP1 453 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 ANKLE1Q8NAG6 615 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 PRCCQ92733 491 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-205ENST00000417664 SCLYQ96I15 445 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 FRMD8Q9BZ67 464 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-205ENST00000417664 STMN4Q9H169 189 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-205ENST00000417664 DDIT4Q9NX09 232 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 RAD54BQ9Y620 910 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 CEP350Q5VT06 3117 aa17.41■□□□□ 0.38
SSBP3-205ENST00000417664 H7C4K7 107 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 TCEA3O75764 348 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 ABHD2P08910 425 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 GOT1P17174 413 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 CYP2C18P33260 490 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 SLC11A1P49279 550 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 SKOR1P84550 965 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 SLC45A4Q5BKX6 768 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 PDZD4Q76G19 769 aaPredicted RBP17.4■□□□□ 0.38
SSBP3-205ENST00000417664 NAT8LQ8N9F0 302 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 FERMT1Q9BQL6 677 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 FBXO44Q9H4M3 255 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 ARHGEF4Q9NR80 690 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 MARCH5Q9NX47 278 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.4■□□□□ 0.384e-13■■■■■ 30.7
SSBP3-205ENST00000417664 BRCA2P51587 3418 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 TET1Q8NFU7 2136 aa17.4■□□□□ 0.38
SSBP3-205ENST00000417664 TBKBP1A7MCY6 615 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 GALTP07902 379 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 MAGEA4P43358 317 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 RABGGTBP53611 331 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 CCL23P55773 120 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 CBLBQ13191 982 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 IKBKEQ14164 716 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 TRIM60Q495X7 471 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 NCBP2-AS2Q69YL0 99 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 FUT10Q6P4F1 479 aa17.39■□□□□ 0.37
SSBP3-205ENST00000417664 CNKSR3Q6P9H4 555 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms