RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 LPCAT2Q7L5N7 544 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 LRRC4Q9HBW1 653 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 TSPAN16Q9UKR8 245 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 KIAA1549LQ6ZVL6 1849 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 EML5Q05BV3 1969 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 TM4SF5O14894 197 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 P4HA2O15460 535 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 CD19P15391 556 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 BCKDHBP21953 392 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 PDE4CQ08493 712 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 BST2Q10589 180 aaKnown RBP26.55■■□□□ 1.84
VEGFA-208ENST00000417285 PAK1Q13153 545 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 CYP2U1Q7Z449 544 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 SMOC1Q9H4F8 434 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 ZDHHC4Q9NPG8 344 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 RXFP3Q9NSD7 469 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 OLA1Q9NTK5 396 aaKnown RBP26.55■■□□□ 1.84
VEGFA-208ENST00000417285 CHMP5Q9NZZ3 219 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 HCN2Q9UL51 889 aa26.55■■□□□ 1.84
VEGFA-208ENST00000417285 TPRP12270 2363 aaKnown RBP26.54■■□□□ 1.84
VEGFA-208ENST00000417285 GFRA2O00451 464 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 KHNYNO15037 678 aaKnown RBP26.54■■□□□ 1.84
VEGFA-208ENST00000417285 GNA14O95837 355 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 PAEPP09466 180 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 HOXB2P14652 356 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 DHPSP49366 369 aaPredicted RBP26.54■■□□□ 1.84
VEGFA-208ENST00000417285 LRMPQ12912 555 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 E2F5Q15329 346 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 MAP7D1Q3KQU3 841 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 RNF43Q68DV7 783 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 CHPFQ8IZ52 775 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 UBR7Q8N806 425 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 TRIML1Q8N9V2 468 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 RLN3Q8WXF3 142 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 KCTD13Q8WZ19 329 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 NT5C1BQ96P26 610 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 IPO9Q96P70 1041 aaKnown RBP26.54■■□□□ 1.84
VEGFA-208ENST00000417285 SLC27A6Q9Y2P4 619 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 ABCA7Q8IZY2 2146 aa26.54■■□□□ 1.84
VEGFA-208ENST00000417285 PRRT4C9JH25 899 aa26.53■■□□□ 1.84
VEGFA-208ENST00000417285 PENKP01210 267 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-208ENST00000417285 ADRB1P08588 477 aa26.53■■□□□ 1.84
VEGFA-208ENST00000417285 SETSIPP0DME0 302 aa26.53■■□□□ 1.84
VEGFA-208ENST00000417285 CORO1AP31146 461 aaKnown RBP26.53■■□□□ 1.84
VEGFA-208ENST00000417285 DPP6P42658 865 aa26.53■■□□□ 1.84
VEGFA-208ENST00000417285 ULBP1Q9BZM6 244 aa26.53■■□□□ 1.84
VEGFA-208ENST00000417285 AGO1Q9UL18 857 aaKnown RBP26.53■■□□□ 1.84
VEGFA-208ENST00000417285 MYO18AQ92614 2054 aaKnown RBP26.53■■□□□ 1.84
VEGFA-208ENST00000417285 SLC12A8A0AV02 714 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 O00370 1275 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 NPC1O15118 1278 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 CYBBP04839 570 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 HMBSP08397 361 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 STX17P56962 302 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 EGFLAMQ63HQ2 1017 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 TMEM270Q6UE05 265 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 LCLAT1Q6UWP7 414 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 TOGARAM2Q6ZUX3 1019 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 SCML4Q8N228 414 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 PLD4Q96BZ4 506 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 GABRG3Q99928 467 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 PLK2Q9NYY3 685 aa26.52■■□□□ 1.84
VEGFA-208ENST00000417285 ACACBO00763 2458 aa26.51■■□□□ 1.84
VEGFA-208ENST00000417285 A0A1W2PQF6 199 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 TULP2O00295 520 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 ZNF217O75362 1048 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 FGFR1OPO95684 399 aaKnown RBP26.51■■□□□ 1.83
VEGFA-208ENST00000417285 STILQ15468 1287 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 FYB2Q5VWT5 728 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 TCEAL6Q6IPX3 200 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 SLC36A4Q6YBV0 504 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 DENND1CQ8IV53 801 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 SIX6OS1Q8N1H7 587 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 CPXM2Q8N436 756 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 UBA3Q8TBC4 463 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 RNF139Q8WU17 664 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 BHMTQ93088 406 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 TCEAL3Q969E4 200 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 LSM14BQ9BX40 385 aaKnown RBP26.51■■□□□ 1.83
VEGFA-208ENST00000417285 CNGB3Q9NQW8 809 aa26.51■■□□□ 1.83
VEGFA-208ENST00000417285 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 GABRG2P18507 467 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 WASP42768 502 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 HARS2P49590 506 aaKnown RBP26.5■■□□□ 1.83
VEGFA-208ENST00000417285 TRIP4Q15650 581 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-208ENST00000417285 CNGA2Q16280 664 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 PKDCCQ504Y2 493 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 BSPRYQ5W0U4 402 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 TMEFF1Q8IYR6 380 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 PPM1KQ8N3J5 372 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 IPO4Q8TEX9 1081 aaKnown RBP26.5■■□□□ 1.83
VEGFA-208ENST00000417285 PIGKQ92643 395 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 ACOX2Q99424 681 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 EDEM2Q9BV94 578 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 SLC2A11Q9BYW1 496 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 ABCC13Q9NSE7 274 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 KIAA1468Q9P260 1216 aa26.5■■□□□ 1.83
VEGFA-208ENST00000417285 MBD1Q9UIS9 605 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-208ENST00000417285 HBS1LQ9Y450 684 aaKnown RBP26.5■■□□□ 1.83
VEGFA-208ENST00000417285 PCDHB4Q9Y5E5 795 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms